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Functional Genomics Core

Functional Genomics Core
功能基因组学核心
批准号:
10704366
负责人:
Leah Claire Kottyan
金额:
$16.05万
依托单位国家:
美国
项目类别:
财政年份:
2016
资助国家:
美国
项目状态:
未结题
起止时间:
2016-08-01 至 2028-06-30
关键词:
ATAC-seqAccelerationAffinityAllelesAnimal ModelAutoimmuneAutomobile DrivingBindingBiological AssayBiological ProcessBoard CertificationCellsChIP-seqChromatinChromatin LoopClinicalClinical ManagementClinical assessmentsCollaborationsCommunitiesComplexConsultationsDNADNA SequenceDNA sequencingDevelopmentDiseaseDisease modelDoctor of PhilosophyElectrophoretic Mobility Shift AssayEnhancersEpidemiologyEtiologyFamilyGenesGeneticGenetic RiskGenetic TranscriptionGenetic studyGenomic approachGenomicsGenotypeHistonesImmuneImmune System DiseasesImmunoprecipitationIndividualInflammatoryInfrastructureInvestigationLibrariesLuciferasesMeasuresMedical centerMolecularMolecular BiologyPathogenesisPathologistPathologyPatientsPediatric HospitalsPeer ReviewPhenotypePhysiciansPlasmidsPopulationPrecipitationPreparationProductivityProteinsProtocols documentationPublicationsRNAReagentRegulationRegulator GenesReporterResearchResearch DesignResearch PersonnelResearch Project GrantsResourcesRheumatismRoleRunningScientistServicesSystemTechnical ExpertiseTechnologyTimeTissue SampleTissuesTransfectionTranslationsautoinflammatorybasechromatin immunoprecipitationcostdeep sequencingexperimental studyfunctional genomicsgenetic associationgenetic regulatory proteingenetic variantgenome-widegenomic datahistone modificationinnovationinsightmolecular diagnosticsnovel therapeutic interventionpediatric rheumatic diseasespolygenic risk scorepromoterrisk variantscreeningsingle-cell RNA sequencingtissue preparationtooltranscriptome sequencingtranscriptomics

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Project Summary/Abstract – Functional Genomics Core (FGC) The Functional Genomics Core (FGC) will provide reagents, strategic, and technical expertise required for efficient investigation of genetic variants likely to be mechanistically important in pediatric rheumatic and inflammatory diseases. In doing so, the Functional Genomics Core will enhance research productivity and efficiency by effectively reducing the “start-up” time required to implement these complex experimental systems, thus reducing costs and effort required and allowing for better study designs and higher quality studies than if investigators were to individually establish this technology. Further, this core will provide access to state-of-the- art technology without requiring the users to become experts in these technologies. The Functional Genomics Core will be a practical vehicle for the translation of basic advances to clinical disease applications and their very important insights into pathogenesis. We will specifically provide consultation, collaboration, hands-on technical expertise, and starter reagents to the research community to perform and analyze functional genomic experiments (Aim1) and identify genotype-dependent gene regulatory mechanisms (Aim 2) to assess the biological function of genetic variants associated with of autoimmune, autoinflammatory, and immune-related rheumatic pediatric diseases. We expect the Functional Genomics Core to be a hub of innovation for the research community, connecting scientists with the tools and expertise to take their research projects to the next level and to accelerate the discovery of the molecular mechanisms that are responsible for the genetic associations observed.
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