Understanding the Protein:Protein Interactions Required for Virus Assembly

了解病毒组装所需的蛋白质：蛋白质相互作用

• 批准号: 8443940
• 负责人: CAROLYN M TESCHKE
• 金额: $ 7.01万
• 依托单位: UNIVERSITY OF CONNECTICUT STORRS
• 依托单位国家: 美国
• 财政年份: 2007
• 资助国家: 美国
• 起止时间: 2007-04-15 至 2015-08-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8443940
• 关键词: Adopted; Affect; Affinity; Amino Acid Substitution; Amino Acids; Antiviral Agents; Bacteriophage P22; Binding; Biochemical Genetics; Biochemistry; Biological Assay; Biological Models; Capsid; Capsid Proteins; Complex; Cryoelectron Microscopy; Data; Development; Double Stranded DNA Virus; Electrostatics; Evolution; Genetic; Goals; Grant; Herpesviridae; In Vitro; Individual; Knowledge; Minor; Modeling; Molecular Chaperones; Molecular Conformation; Morphology; Mutagenesis; Outcome; Pharmaceutical Preparations; Phase; Process; Protein Analysis; Protein Binding; Protein Subunits; Proteins; Public Health; Publishing; Research; Research Personnel; Resolution; Role; Scaffolding Protein; Site; Structure; System; Tertiary Protein Structure; Testing; Therapeutic; Tube; Variant; Viral; Virion; Virus; Virus Assembly; Work; adenovirus penton protein; base; design; flexibility; in vivo; inhibitor/antagonist; innovation; monomer; mutant; novel; particle; programs; protein complex; protein protein interaction; reconstruction; scaffold; telokin; therapeutic target; virus morphology

DESCRIPTION (provided by applicant): Icosahedral viral capsid assembly is a highly coordinated process that involves addition of multiple protein subunits, ultimately leading to an infectious virion of proper size and morphology. Often identical coat protein subunits occupy non-identical (hexons and pentons) sites in the icosahedron, which is known as conformational switching. For many dsDNA viruses, scaffolding proteins are used to direct proper assembly of coat protein so that the hexons and pentons are arranged correctly. How capsid proteins are programmed to adopt the correct conformations such that the appropriate assembly product is formed is not understood in detail for any virus, and is the rationale for this project. In addition, the assembly process presents a viable therapeutic target because the repeated use of the same subunits means that a molecule that interferes with capsid subunit associations will be a particularly efficacious inhibitor. Thus, the long-term goal for this work is to achieve a mechanistic understanding of protein:protein interactions involved in capsid assembly and to concisely define how those interactions are employed in each step in proper assembly. Capsid assembly will be investigated using bacteriophage P22 as a model dsDNA virus. In phage P22, herpesvirus and many other dsDNA viruses, the initial product of assembly is a precursor capsid, known as the procapsid (PC). Scaffolding protein directs proper assembly of coat protein, the major capsid protein, to form PCs. Scaffolding protein also directs the incorporation of the portal protein complex in vivo. P22 assembly is an excellent model system because complex in vivo processes can be mimicked in vitro. When P22 purified coat and scaffolding protein monomers are mixed together, procapsid-like particles are robustly generated. The simple genetics and well established biochemistry of P22 offers significant advantages as an assembly model over complex eukaryotic dsDNA viruses. The central hypothesis for this project is that capsid assembly is driven by specific weak protein:protein interactions, and is finely tuned by these interactions during nucleation and elongation to form the proper assembly products. The objective for this granting period is to test our central hypothesis through a detailed analysis of the protein:protein interactions that drive proper P22 procapsid assembly by pursuing the following three specific aims: 1) Identify regions in domains of coat protein that are involved in virus form determination; 2) Elucidate the role of the telokin domain in P22 capsid assembly and stabilization; 3) Understand scaffolding protein control of P22 capsid assembly. Each of these aims is supported by significant preliminary data generated in the investigator's and colaborators' labs. This project is innovative because the well established biochemical and genetic assays of the P22 system will be combined with recent structural data and used to interrogate the role of the capsid protein interactions in virion assembly. The proposed research is significant because the outcome will be a detailed mechanistic understanding of virion assembly due to weak interactions of capsid proteins.

描述（由申请人提供）：二十面体病毒衣壳组装是一个高度协调的过程，涉及多个蛋白质亚基的添加，最终导致具有适当大小和形态的感染性病毒粒子。通常相同的外壳蛋白亚基在二十面体中占据不相同的（六边形和五边形）位点，这被称为构象转换。对于许多dsDNA病毒，支架蛋白被用来指导外壳蛋白的正确组装，从而使六边形和五边形正确排列。衣壳蛋白如何被编程以采用正确的构象，从而形成适当的组装产物，对于任何病毒都没有详细的了解，这是这个项目的基本原理。此外，组装过程提供了一个可行的治疗靶点，因为重复使用相同的亚基意味着干扰衣壳亚基结合的分子将是一种特别有效的抑制剂。因此，这项工作的长期目标是实现对蛋白质的机制理解：衣壳组装中涉及的蛋白质相互作用，并简明地定义这些相互作用如何在适当组装的每个步骤中发挥作用。将以噬菌体P22为模型研究衣壳组装。在噬菌体P22、疱疹病毒和许多其他dsDNA病毒中，组装的初始产物是前体衣壳，称为原衣壳（PC）。支架蛋白指导衣壳蛋白（主要的衣壳蛋白）的适当组装，形成pc。支架蛋白也指导门脉蛋白复合物在体内的结合。P22组装是一个很好的模型系统，因为复杂的体内过程可以在体外模拟。当P22纯化的衣壳和支架蛋白单体混合在一起时，会产生类似原衣壳的颗粒。与复杂的真核dsDNA病毒相比，P22具有简单的遗传和良好的生物化学特性，具有显著的装配模型优势。这个项目的中心假设是衣壳组装是由特定的弱蛋白相互作用驱动的，并且在成核和延伸过程中，这些相互作用精细地调节以形成适当的组装产物。这一授权期的目标是通过对蛋白质的详细分析来检验我们的中心假设：通过追求以下三个特定目标，驱动P22原衣壳组装的蛋白质相互作用：1)确定外壳蛋白结构域中参与病毒形态决定的区域；2)阐明末端蛋白结构域在P22衣壳组装和稳定中的作用；3)了解P22衣壳组装的脚手架蛋白控制。这些目标中的每一个都得到了研究者和合作者实验室中产生的重要初步数据的支持。这个项目是创新的，因为P22系统的完善的生化和遗传分析将与最近的结构数据相结合，并用于询问衣壳蛋白相互作用在病毒粒子组装中的作用。这项研究具有重要意义，因为其结果将是对衣壳蛋白弱相互作用导致的病毒粒子组装的详细机制理解。