Sequencing and microbiome profiling core
Sequencing and microbiome profiling core
批准号:
9265902
负责人:
Matteo Pellegrini
金额:
$18.48万
依托单位国家:
美国
项目类别:
财政年份:
--
资助国家:
美国
项目状态:
未结题
起止时间:
至
关键词:
AtherosclerosisBioinformaticsBiologyDNA Sequencing FacilityDataData AnalysesData DisplayData QualityDetectionFamiliarityFrequenciesGenerationsGenesGenomeGenomicsHumanLibrariesMeasurementMeasuresMetagenomicsMethodologyMolecular GeneticsMusOrganismProcessProtein IsoformsRNA SplicingRNA, Ribosomal, 16SResearchResearch PersonnelResolutionSamplingServicesTranscriptVariantbasebisulfitebisulfite sequencingepigenomicsexomeexperiencegenetic approachgenome analysisgenome browsergenome-widegenomic datamembermethylomemicrobiomenext generationrare varianttooltranscriptometranscriptome sequencingtranscriptomicswhole genome
中文摘要
项目摘要
芯A
该核心的目的是提供转录组,甲基化组,
外显子组和微生物组。下一代测序仪已经改变了基因组研究,
这些数据的生成和分析仍然是一个瓶颈。我们的核心将提供必要的排序,
数据分析服务,使该联营体成员能够获得和解释这些数据。的
该核心的PI和工作人员在基因组数据的生成和分析方面拥有丰富的经验,
熟悉相关项目的基础生物学。尽管其他测序核心
存在于UCLA,这些都不提供本文提出的所有服务。我们在这里提出的核心将
使这个联盟内的小组不仅能够从他们的样品中收集测序数据,
还可以获得经过处理和分析的数据,这些数据可以由研究人员直接解释,而无需进行广泛的
计算机专业知识。这一功能应该使基因组学研究更容易为所有人所用
这个财团的成员。
英文摘要
PROJECT SUMMARY
Core A
The purpose of this core is to provide sequencing and bioinformatic analyses of transcriptomes,methylomes,
exomes and mircobiomes. Next-generation sequencers have transformed genomic research, yet the
generation and analysis of this data remains a bottleneck. Our core will provide the essential sequencing and
data analysis service to render this data accessible and interpretable to the members of this consortium. The
PIs and staff of this core have extensive experience in the generation and analysis of genomic data, as well as
familiarity with the underlying biology of the associated projects. Despite the fact that other sequencing cores
exist at UCLA, none of these provide all the services proposed herein. The core we are proposing here will
enable the groups within this consortium to be able to not only collect sequencing data from their samples, but
also obtain processed and analyzed data that can be directly interpreted by researchers without extensive
computational expertise. This functionality should render genomics research far more accessible to all
members of this consortium.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
Bioinformatics Core
-
批准号:10404438
-
项目类别:
-
资助金额:$39.22万
-
财政年份:2022
-
负责人:Matteo Pellegrini
-
依托单位:
ENHANCING THE INTERNATIONAL MOLECULAR EXCHANGE (IMEX): PROVIDING AN IMPROVED COMMUNITY-ORIENTED MOLECULAR INTERACTIONS RESOURCE
-
批准号:10157852
-
项目类别:
-
资助金额:$1.09万
-
财政年份:2018
-
负责人:Matteo Pellegrini
-
依托单位:
ENHANCING THE INTERNATIONAL MOLECULAR EXCHANGE (IMEX): PROVIDING AN IMPROVED COMMUNITY-ORIENTED MOLECULAR INTERACTIONS
-
批准号:10166532
-
项目类别:
-
资助金额:$10.94万
-
财政年份:2018
-
负责人:Matteo Pellegrini
-
依托单位:
Enhancing the International Molecular Exchange (IMEx): Providing an Improved Community-Oriented Molecular Interactions Resource
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批准号:9889148
-
项目类别:
-
资助金额:$44.34万
-
财政年份:2018
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负责人:Matteo Pellegrini
-
依托单位:
Biomedical Big Data Training Grant
-
批准号:9254611
-
项目类别:
-
资助金额:$26.69万
-
财政年份:2015
-
负责人:Matteo Pellegrini
-
依托单位:
Biomedical Big Data Training Grant
-
批准号:9062411
-
项目类别:
-
资助金额:$26.39万
-
财政年份:2015
-
负责人:Matteo Pellegrini
-
依托单位:
Core A: Bioinformatics Core
-
批准号:8520353
-
项目类别:
-
资助金额:$23.48万
-
财政年份:2013
-
负责人:Matteo Pellegrini
-
依托单位:
Core A: Bioinformatics Core
-
批准号:8382278
-
项目类别:
-
资助金额:$24.75万
-
财政年份:2012
-
负责人:Matteo Pellegrini
-
依托单位:
DNA methylation and its relationship to gene expression and physiologic traits
-
批准号:8293102
-
项目类别:
-
资助金额:$45.19万
-
财政年份:2011
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负责人:Matteo Pellegrini
-
依托单位:
DNA methylation and its relationship to gene expression and physiologic traits
-
批准号:8185206
-
项目类别:
-
资助金额:$45.19万
-
财政年份:2011
-
负责人:Matteo Pellegrini
-
依托单位:
DNA methylation and its relationship to gene expression and physiologic traits
-
批准号:8449676
-
项目类别:
-
资助金额:$43.61万
-
财政年份:2011
-
负责人:Matteo Pellegrini
-
依托单位:
DNA methylation and its relationship to gene expression and physiologic traits
-
批准号:8635367
-
项目类别:
-
资助金额:$45.19万
-
财政年份:2011
-
负责人:Matteo Pellegrini
-
依托单位:
Core A: Bioinformatics Core
-
批准号:8207366
-
项目类别:
-
资助金额:$23.1万
-
财政年份:--
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负责人:Matteo Pellegrini
-
依托单位:
Bioinformatics Core
-
批准号:8712137
-
项目类别:
-
资助金额:$12.79万
-
财政年份:--
-
负责人:Matteo Pellegrini
-
依托单位:
Core A: Bioinformatics Core
-
批准号:8710267
-
项目类别:
-
资助金额:$24.71万
-
财政年份:--
-
负责人:Matteo Pellegrini
-
依托单位:
Bioinformatics Core
-
批准号:8531871
-
项目类别:
-
资助金额:$12.15万
-
财政年份:--
-
负责人:Matteo Pellegrini
-
依托单位:
Bioinformatics Core
-
批准号:8343698
-
项目类别:
-
资助金额:$12.79万
-
财政年份:--
-
负责人:Matteo Pellegrini
-
依托单位:
Sequencing and microbiome profiling core
-
批准号:9109005
-
项目类别:
-
资助金额:$18.48万
-
财政年份:--
-
负责人:Matteo Pellegrini
-
依托单位:
海外基金