Ultrapotent Inhibitors of Wild-type and Multi-drug Resistant HIV

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DESCRIPTION: Nucleoside reverse transcriptase inhibitors (NRTIs) are key components of Highly Active Antiretroviral Therapies (HAART) for the treatment of HIV-infected patients. All FDA-approved anti-HIV NRTIs lack a 3'-OH, and therefore inhibit DNA polymerization by HIV RT through immediate chain termination. The absence of a 3'-OH also imparts detrimental properties to these NRTIs by reducing their binding affinity for RT compared to the natural dNTP substrates and reducing intracellular conversion to active NRTI triphosphates. We have reported during the first funding cycle that 4'-ethynyl-2-fluoro-2'-deoxyadenosine (EFdA) is a nucleoside analog that retains the 3'-OH moiety and demonstrates exceptional antiviral properties (EC50 = 50 pM in PBMCs) and a remarkable selectivity index (>200,000). EFdA's potency and selectivity index is by orders of magnitude more favorable than all currently-approved anti-HIV drugs. Despite the presence of a 3'-OH, the incorporated EFdA-monophosphate acts primarily as an immediate chain terminator because RT has difficulty translocating on the primer possessing 3'-terminal EFdA-MP, which is a unique mechanism of action. Therefore, EFdA-TP is a Translocation-Defective RT inhibitor (TDRTI). Additionally, EFdA has also been shown to efficiently inhibit clinically-important NRTI-resistant HIV strains, and demonstrating hypersusceptibility to the tenofovir-resistant K65R HIV. Notably, in our study of SIV-infected macaques the animals that had suppressed viral loads upon treatment with EFdA carried the M184V mutation, suggesting that M184V can be effectively suppressed by EFdA. We have also shown that EFdA has a remarkably high barrier for HIV resistance, and many EFdA-resistant HIV strains have reduced replication capacity. More recently we have shown that the combination of EFdA with Rilpivirine shows a synergistic effect, which would be useful in the design of new therapeutic regimens. We will build on our work from the first funding cycle to understand the potency of EFdA at the RT and cellular levels, development of EFdA resistance, and EFdA combinations with currently-approved anti-HIV drugs. We will also use biochemical and structural approaches to characterize the inhibition mechanism of EFdA at the RT level, the activation of EFdA by deoxycytidine kinase (dCK) and deamination by adenosine deaminase (ADA). This study will provide information that will guide the design of novel NRTIs and EFdA combination therapies with other approved anti-HIV drugs that may lead to a breakthrough in the treatment of HIV infection.