Data Exploration and Analysis Portal for Brain Research through Advanced Imaging Neuroscience
Data Exploration and Analysis Portal for Brain Research through Advanced Imaging Neuroscience
批准号:
10011169
负责人:
Chun Chieh Fan
金额:
$114.25万
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
已结题
起止时间:
2020-08-17 至 2024-07-31
关键词:
AdolescentAdultBehaviorBehavioralBehavioral MechanismsBrainBrain MappingBrain imagingBrain regionChildCommunitiesComplexDataData AnalysesData ScientistDevelopmentElementsEnrollmentEpidemiologyFosteringGoalsHumanImageIndividualInformaticsInvestigationKnowledgeLinkLogisticsLongevityMapsMeasuresMethodologyMethodsMindModalityModelingModernizationMultimodal ImagingNational Institute of Mental HealthNatureNeurosciencesOnline SystemsOntologyOutcomePatternPopulationProbabilityProcessReproducibilityResearchResearch DesignResearch PersonnelResolutionRisk FactorsSample SizeSamplingSampling StudiesScoring MethodSiteSpatial DistributionSpecific qualifier valueStatistical Data InterpretationStatistical ModelsTestingTimeWorkbasebrain researchcognitive developmentcohortconnectomedata and analysis portaldata archivedata collection sitedata explorationdata resourcedesignexperienceflexibilityfollow-upimage processingimaging modalityinformatics toolinnovationlongitudinal designmodifiable riskneurodevelopmentnovelpreventstructured datasymposiumtoolweb-based informatics
中文摘要
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英文摘要
Project Summary
Population neuroscience requires investigation of brain-behavioral relationships within epidemiological
samples studied in longitudinal designs, including a large number of assessment modalities and with subjects
enrolled at many data collection sites to achieve a large sample and broad representation of the population. Of
note, the Adolescent Brain Cognitive Development (ABCD) Study and the Human Connectome Project
Development (HCP-D and HCP-A), have, in aggregate, enrolled thousands of individuals, many as children
and adolescents, and are expected to follow them for up to ten years. Foreseeing the need for an accessible
analysis platform to foster rigorous modeling, the ABCD Data Analysis and Informatics Center (DAIC) has
developed and deployed the web-based Data Exploration and Analysis Portal (DEAP). Despite its nascent
stage, the present version of DEAP already provides a flexible tool that meets many needs of both data
scientists and applied investigators. Here, we propose to produce a more versatile extension of DEAP, the
Data Exploration and Analysis Portal for Brain Research through Advanced Imaging Neuroscience (DEAP-
BRAIN). We will implement important new features by incorporating approaches for: i) including HCP data to
assess generalizability; ii) newly developed poly-vertex score as a method to summarize generalizability of
whole brain patterns; and iii) bias assessment based on causal inference methods. By the completion of this
proposal, we will facilitate reproducible and valid scientific discovery through providing the research community
with an easy to use but sophisticated informatics tool. The Specific Aims of the proposal are:
Specific Aim 1: Integrating HCP data into DEAP-BRAIN. We will integrate ABCD and HCP data through
homogenizing the imaging processing and variable conventions. The HCP adult cohort and HCP lifespan
development cohort will be integrated in DEAP, allowing a formal assessment of generalizability.
Specific Aim 2: Implementing poly-vertex scores (PVS) as the framework for assessing generalizability
of brain mapping. We will implement our newly developed PVS method, an innovative approach to
summarize the reproducibility of association patterns across brain.
Specific Aim 3: Implementing bias assessment modules. We will implement the bias assessment module
for DEAP users based on causal inference principles, using propensity scores, principal component methods,
and synthetic controls.
期刊论文(16)
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科研奖励(0)
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Intelligence Polygenic Score Is More Predictive of Crystallized Measures: Evidence From the Adolescent Brain Cognitive Development (ABCD) Study.
智力多基因评分更能预测结晶测量:来自青少年大脑认知发展 (ABCD) 研究的证据。
DOI:
10.1177/09567976231160702
发表时间:
2023
期刊:
Psychological science
影响因子:
8.2
作者:
[Loughnan,RobertJ, Palmer,ClareE, Thompson,WesleyK, Dale,AndersM, Jernigan,TerryL, ChiehFan,Chun]
通讯作者:
ChiehFan,Chun
DOI:
10.1002/sim.9359
发表时间:
2022-06-15
期刊:
STATISTICS IN MEDICINE
影响因子:
2
作者:
[Ren, Junting, Tapert, Susan, Fan, Chun Chieh, Thompson, Wesley K.]
通讯作者:
Thompson, Wesley K.
DOI:
10.1111/jcpp.13649
发表时间:
2022-12
期刊:
JOURNAL OF CHILD PSYCHOLOGY AND PSYCHIATRY
影响因子:
7.6
作者:
[Loughnan, Robert J., Palmer, Clare E., Makowski, Carolina, Thompson, Wesley K., Barch, Deanna M., Jernigan, Terry L., Dale, Anders M., Fan, Chun Chieh]
通讯作者:
Fan, Chun Chieh
Individual Differences in Cognitive Performance Are Better Predicted by Global Rather Than Localized BOLD Activity Patterns Across the Cortex.
认知表现的个体差异可以通过大脑皮层的整体而不是局部的大胆活动模式更好地预测。
DOI:
10.1093/cercor/bhaa290
发表时间:
2021
期刊:
Cerebral cortex (New York, N.Y. : 1991)
影响因子:
--
作者:
[Zhao,Weiqi, Palmer,ClareE, Thompson,WesleyK, Chaarani,Bader, Garavan,HughP, Casey,BJ, Jernigan,TerryL, Dale,AndersM, Fan,ChunChieh]
通讯作者:
Fan,ChunChieh
DOI:
10.1001/jamaneurol.2022.2030
发表时间:
2022-09-01
期刊:
JAMA NEUROLOGY
影响因子:
29
作者:
[Loughnan, Robert, Ahern, Jonathan, Tompkins, Cherisse, Palmer, Clare E., Iversen, John, Thompson, Wesley K., Andreassen, Ole, Jernigan, Terry, Sugrue, Leo, Dale, Anders, Boyle, Mary E. T., Fan, Chun Chieh]
通讯作者:
Fan, Chun Chieh
共 9 条
Identifying and quantifying genetic effects on neurodevelopmental trajectories in adolescents
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批准号:10817321
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项目类别:
-
资助金额:$33.28万
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财政年份:2023
-
负责人:Chun Chieh Fan
-
依托单位:
海外基金