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Microfluidic intact cell platform: A novel tool for oral cancer detection

Microfluidic intact cell platform: A novel tool for oral cancer detection
微流控完整细胞平台:口腔癌检测的新工具
批准号:
10043470
负责人:
Umut A. Gurkan
金额:
$41.4万
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
已结题
起止时间:
2020-08-01 至 2023-07-31
关键词:
AddressAliquotBedside TestingsBenignBiologicalBiological AssayBiological MarkersBiopsyCaliberCancer DetectionCancerousCarcinoma in SituCationsCell membraneCellsCellular AssayCellular PhoneClinical ResearchCoinCollaborationsCollecting CellComputational algorithmComputer AnalysisConsumptionContralateralCountryCustomDental ClinicsDetectionDeveloping CountriesDevelopmentDevicesDiagnosisEarly DiagnosisEarly InterventionEngineeringEnzyme-Linked Immunosorbent AssayEpithelial CellsEventExpression ProfilingFluorescenceFluorescent Antibody TechniqueFutureGoalsGoldHead and Neck CancerHealth care facilityHistopathologyHourHumanImageImmobilizationIndiaIndigenousIndividualLabelLaboratoriesLesionMeasuresMedicineMethodsMicrofluidic MicrochipsMicrofluidicsMolecularMonitorMouth CarcinomaMyelogenousNon-Invasive LesionObservational StudyOralOral StageOral cavityOral mucous membrane structurePainPathologyPatient-Focused OutcomesPatientsPeptidesPhasePhenotypePrimary Health CareProceduresProteinsReportingResearch PersonnelResourcesSamplingScreening for Oral CancerScreening procedureSiteSpecificitySwabSystemTechniquesTechnologyTestingTimeTissuesUniversity HospitalsWorkantimicrobialantimicrobial peptidebasebeta pleated sheetbeta-Defensinsbeta-defensin 3biomarker developmentcellular imagingchemokineclinical carecostcost effectivedeep learning algorithmdiagnosis standarddiagnostic accuracyexperiencefluorescence imagingimaging Segmentationimaging capabilitiesimaging platformimmunoregulationimprovedimproved outcomeindexinginnovationmalignant mouth neoplasmmetaplastic cell transformationmicrofluidic technologymonitoring devicemouth squamous cell carcinomamucosal sitenovelnovel strategiesoral lesionoverexpressionpatient populationpoint of careportabilityportable monitoringpremalignantprimary care settingprospectiveprototyperecruitscalpelscreeningsocioeconomicssuccesstertiary caretool

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中文摘要
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英文摘要
Oral squamous cell carcinoma (OSCC) claims the lives of thousands in the U.S. and hundreds of thousands worldwide annually. A biopsy followed by histopathology, the gold standard for the diagnosis of OSCC, is painful, invasive, costly, not practical if longitudinal assessments of the same lesion are required and oftentimes is not available or imprecise in third world countries. A tool that quickly distinguishes cancerous from non- cancerous lesions and identifies progressive or transforming lesions could allow for early intervention, which would improve outcomes and negate the need for unnecessary biopsies in patients whose lesions remain benign or haven’t begun to degenerate. Therefore, there is an unmet need for a rapid, non-invasive, objective and cost-effective test for OSCC. We and others have reported that an altered expression profile of human beta defensin 3 (hBD-3), an epithelial cell derived antimicrobial peptide (AMP), and hBD-2, another epithelial cell AMP, is an early event in OSCC. Therefore, the ratio of hBD-3 and hBD-2 in the lesion, when compared to the contralateral site, could be exploited in distinguishing OSCC from other lesions of the oral cavity. We refer to this ratio as the beta defensin index (BDI). Our ongoing clinical study of 78 subjects with suspicious oral lesions demonstrated high sensitivity (100%) and specificity (74%) of the ELISA based BDI in distinguishing cancerous from noncancerous oral lesions (P<0.0001). With the high accuracy (98%) of our BDI based molecular assay, we now wish to advance our novel platform from the laborious, time consuming ELISA format into an imaging-based point-of-care (POC) device that utilizes microfluidic technology to quantify the BDI with an expected turnover time of half an hour. Our microfluidic intact cell assay (MICA) approach to developing a POC device for oral cancer detection is unique; it utilizes intact epithelial cells trapped in a microfluidic chip encompassing microfabricated pillar arrays with varying spaces to allow the capture of epithelial cells. Upon capture, the cells are permeabilized and labeled with fluorescent antibodies for hBD ratio analysis. We employ automated fluorescence imaging and computational algorithm to enable automated calculation of the BDI scores. We now hypothesize that the ELISA format that can effectively detect oral cancer, can be configured for point of care MICA, retaining its high accuracy and making it easier to use worldwide. To advance the discovery of this new approach for oral cancer detection, we propose the following aims: 1. Develop a working prototype of a MICA POC device for oral cancer testing equipped with cell imaging and BDI calculation capabilities. 2. Conduct a discovery phase study where MICA POC and ELISA, as independent assays, will be compared with pathology review in their ability to detect oral cancer. The MICA POC, while not intending to replace biopsy, could be deployed, in the future, to objectively and non- invasively determine who actually needs a biopsy, monitor oral premalignant lesions in real world practice and fulfill a major unmet need in low-socio economic countries where pathology review is lacking and/or unreliable.
期刊论文(5)
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科研奖励(0)
会议论文
DOI: 10.21147/j.issn.1000-9604.2021.05.03
发表时间: 2021-10-31
期刊: Chinese journal of cancer research = Chung-kuo yen cheng yen chiu
影响因子: --
作者: [Lu C, Shiradkar R, Liu Z]
通讯作者: Liu Z
DOI: 10.1016/j.isci.2022.103856
发表时间: 2022-03-18
期刊: iScience
影响因子: 5.8
作者: [Zhang L, Ghosh SK, Basavarajappa SC, Chen Y, Shrestha P, Penfield J, Brewer A, Ramakrishnan P, Buck M, Weinberg A]
通讯作者: Weinberg A
Feature-driven local cell graph (FLocK): New computational pathology-based descriptors for prognosis of lung cancer and HPV status of oropharyngeal cancers.
特征驱动的局部细胞图(FLOCK):用于肺癌预后和口咽癌的HPV状态的新的基于计算病理学的描述。
DOI: 10.1016/j.media.2020.101903
发表时间: 2021-03
期刊: Medical image analysis
影响因子: 10.9
作者: [Lu C, Koyuncu C, Corredor G, Prasanna P, Leo P, Wang X, Janowczyk A, Bera K, Lewis J Jr, Velcheti V, Madabhushi A]
通讯作者: Madabhushi A
An unsupervised method for histological image segmentation based on tissue cluster level graph cut.
一种基于组织簇级图割的无监督组织学图像分割方法。
DOI: 10.1016/j.compmedimag.2021.101974
发表时间: 2021
期刊: Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society
影响因子: --
作者: [Xu,Hongming, Liu,Lina, Lei,Xiujuan, Mandal,Mrinal, Lu,Cheng]
通讯作者: Lu,Cheng
Microfluidic Impedance Red Cell Assay (MIRCA) for Emerging Pharmacologic and Gene based Therapies for Sickle Cell Disease
  • 批准号:
    10687427
  • 项目类别:
  • 资助金额:
    $66.32万
  • 财政年份:
    2022
  • 负责人:
    Umut A. Gurkan
  • 依托单位:
Standardized Monitoring of Cellular Adhesion to Improve Clinical Care in Sickle Cell Disease
  • 批准号:
    9975877
  • 项目类别:
  • 资助金额:
    $39.32万
  • 财政年份:
    2016
  • 负责人:
    Umut A. Gurkan
  • 依托单位:
Standardized Monitoring of Cellular Adhesion to Improve Clinical Care in Sickle Cell Disease
  • 批准号:
    9279250
  • 项目类别:
  • 资助金额:
    $39.4万
  • 财政年份:
    2016
  • 负责人:
    Umut A. Gurkan
  • 依托单位:
海外基金