Core C: Bioinformatics and Genomics Core
Core C: Bioinformatics and Genomics Core
批准号:
10627091
负责人:
CHITTIBABU GUDA
金额:
$32.34万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
未结题
起止时间:
2009-04-15 至 2028-05-31
关键词:
ATAC-seqAgingArchivesAreaBioinformaticsCellsCharacteristicsChromatinCollaborationsCommunitiesCore FacilityCryoelectron MicroscopyCustomDataData AnalysesData SetDatabasesDistantEducational workshopEnvironmentEpigenetic ProcessFamily suidaeGene ExpressionGene Expression ProfileGenerationsGenesGenomicsGeographic LocationsGoalsHumanHuman ResourcesImageIndividualLinkLocationMapsMass Spectrum AnalysisMedical centerMetadataMethodsModelingMultiomic DataMusNatureNebraskaPathway AnalysisPathway interactionsPituitary GlandPolysaccharidesProteomicsProtocols documentationRattusResearchResearch Project GrantsResourcesSamplingScienceSignal TransductionSiteStructureTechniquesTechnologyTestingTissuesTrainingTraining ActivityTraining and InfrastructureUniversitiesValidationVariantVisualizationbioinformatics toolbiological researchcloud basedcomputer infrastructuredata accessdata analysis pipelinedifferential expressionexperimental analysisexperimental studygene productglycosylationinnovationmiRNA expression profilingmultiple omicsnext generation sequencingprogramsprotein expressionsearchable databasesingle-cell RNA sequencingsuccesstooltraining projecttranscriptome sequencingtranscriptomicsweb interfaceweb portalweb serviceswebinar
中文摘要
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英文摘要
Project Summary/Abstract – Core C
Bioinformatics has become an integral part of biological research due to the high-throughput nature
of multi-omics experiments warranting the need for having the infrastructure and trained personnel
to support the advancement of science of the research projects. The Bioinformatics and Genomics
Core (Core C) will continue to serve as a linchpin in the overall success of the program project by
supporting the generation, storage, processing, analysis and accessing of experimental data. Core
C will be led by Drs. Babu Guda and James Eudy, who will provide complementary expertise in
Bioinformatics and Genomics areas, respectively. This Core is innovative by having a fully integrated
Bioinformatics as well as Genomics units within, which allows full spectrum access to cutting-edge
experimental and analytical techniques under one Core. The specific aims are: Aim 1: Support the
sequencing and analysis of multi-omics data for research projects. Aim 2: Integrative analysis and
functional characterization of significant genes, gene products, enriched pathways, and upstream
regulators for hypothesis generation and testing. Aim 3: Develop a web portal to centralize access to
multi-omics data from all research projects and to facilitate bioinformatics training activities. Core C will
make a big impact on the overall success of the project by providing resources, personnel support and
developing cutting-edge technologies and custom data analysis methods for all research projects.
Proposed cloud-based web portal backed by a searchable database provides easy access to all
experimental data, metadata, and the training materials facilitating synergistic interactions among the
project personnel across multiple sites.
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会议论文
Biomedical Informatics, Bioinformatics, and Cyberinfrastructure Enhancement Core
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批准号:10478974
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项目类别:
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资助金额:$35.06万
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财政年份:2016
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负责人:CHITTIBABU GUDA
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依托单位:
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批准号:10281662
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项目类别:
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资助金额:$35.35万
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财政年份:2016
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负责人:CHITTIBABU GUDA
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依托单位:
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批准号:8331447
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项目类别:
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资助金额:$21.83万
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财政年份:2009
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负责人:CHITTIBABU GUDA
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依托单位:
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批准号:8234952
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项目类别:
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资助金额:$21.83万
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财政年份:2009
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负责人:CHITTIBABU GUDA
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依托单位:
Cataloging the subcellular and suborganellar proteomes of sequenced genomes
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批准号:8538440
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项目类别:
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资助金额:$17.56万
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财政年份:2009
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负责人:CHITTIBABU GUDA
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依托单位:
Cataloging the subcellular and suborganellar proteomes of sequenced genomes
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批准号:7918788
-
项目类别:
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资助金额:$0.0万
-
财政年份:2009
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负责人:CHITTIBABU GUDA
-
依托单位:
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-
批准号:9280513
-
项目类别:
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资助金额:$12.09万
-
财政年份:2009
-
负责人:CHITTIBABU GUDA
-
依托单位:
Cataloging the subcellular and suborganellar proteomes of sequenced genomes
-
批准号:8138592
-
项目类别:
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资助金额:$14.7万
-
财政年份:2009
-
负责人:CHITTIBABU GUDA
-
依托单位:
An integrated approach to infer and validate domain-domain interactions in protei
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批准号:7367241
-
项目类别:
-
资助金额:$22.72万
-
财政年份:2008
-
负责人:CHITTIBABU GUDA
-
依托单位:
Nebraska Research Network in Functional Genomics
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批准号:10624375
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项目类别:
-
资助金额:$35.87万
-
财政年份:2001
-
负责人:CHITTIBABU GUDA
-
依托单位:
Nebraska Research Network in Functional Genomics
-
批准号:10426059
-
项目类别:
-
资助金额:$35.87万
-
财政年份:2001
-
负责人:CHITTIBABU GUDA
-
依托单位:
Bioinformatics Shared Resource
-
批准号:10491798
-
项目类别:
-
资助金额:$8.29万
-
财政年份:1997
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负责人:CHITTIBABU GUDA
-
依托单位:
Bioinformatics (BISR)
-
批准号:9981645
-
项目类别:
-
资助金额:$10.33万
-
财政年份:1997
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负责人:CHITTIBABU GUDA
-
依托单位:
Bioinformatics Shared Resource
-
批准号:10270913
-
项目类别:
-
资助金额:$8.27万
-
财政年份:1997
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负责人:CHITTIBABU GUDA
-
依托单位:
UNMC Bioinformatics Core
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批准号:8899797
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项目类别:
-
资助金额:$35.54万
-
财政年份:--
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负责人:CHITTIBABU GUDA
-
依托单位:
Core C - Bioinformatics and Genomics Core
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批准号:9755298
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项目类别:
-
资助金额:$11.93万
-
财政年份:--
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负责人:CHITTIBABU GUDA
-
依托单位:
UNMC Bioinformatics Core
-
批准号:9095404
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项目类别:
-
资助金额:$34.74万
-
财政年份:--
-
负责人:CHITTIBABU GUDA
-
依托单位:
Bioinformatics (BISR)
-
批准号:9755217
-
项目类别:
-
资助金额:$10.33万
-
财政年份:--
-
负责人:CHITTIBABU GUDA
-
依托单位:
Nebraska Research Network in Functional Genomics
-
批准号:9900469
-
项目类别:
-
资助金额:$35.87万
-
财政年份:--
-
负责人:CHITTIBABU GUDA
-
依托单位:
海外基金