Clostridium difficile Toxin Gene Regulation
Clostridium difficile Toxin Gene Regulation
批准号:
8071802
负责人:
ABRAHAM Lincoln SONENSHEIN
金额:
$1.69万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2010
资助国家:
美国
项目状态:
已结题
起止时间:
2010-06-01 至 2010-09-30
关键词:
AffectAffinity ChromatographyAmino AcidsAntibiotic-Associated ColitisBacillus subtilisBindingBiochemistryBiological AssayBiotinCarbonCellsClostridium difficileClostridium perfringensCo-ImmunoprecipitationsCollectionComplexDNA Microarray ChipDNA SequenceDNA-Directed RNA PolymeraseDiseaseGene ExpressionGene Expression RegulationGenesGeneticGenetic TranscriptionGlucoseGrowthHomologous GeneIn VitroKnock-outLaboratoriesMeasuresMediatingMediator of activation proteinMicroarray AnalysisMolecularMolecular GeneticsMutationPathogenicityPathogenicity IsletsPhasePhysiologyPoint MutationPromoter RegionsProteinsPseudomembranous ColitisRegulationRepressionResearchResearch PersonnelRoleSchemeSigma FactorSignal TransductionSiteSourceSystemTemperatureTestingTimeToxinVirulenceVirulence FactorsVitaminsWorkbasecomparative genomicscrosslinkgenetic analysisgenetic regulatory proteinin vivomutantnovelnull mutationnutritionoverexpressionpreventprogramspromoterprotein protein interactionresearch studyresponsetool
中文摘要
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英文摘要
DESCRIPTION (provided by applicant): Clostridium difficile is the principal causative agent of antibiotic-associated colitis and the only known cause of pseudomembranous colitis, a potentially lethal disease. Two large toxin proteins, encoded by the toxA and toxB genes, which lie within a 19 kb pathogenicity islet, are the primary virulence factors. Previous work from the applicants' laboratories has shown that transcription of the tox genes depends entirely on TxeR, a novel RNA polymerase sigma factor encoded within the same pathogenicity locus. The level of expression is strongly modulated, however, by the growth state of the cells and by environmental conditions. For instance, for cells growing in broth medium, tox gene transcription is restricted to stationary phase cells and is repressed by rapidly metabolizable carbon sources, such as glucose. Other factors that influence toxin synthesis are the availability of biotin and certain amino acids and the temperature of cultivation. The present proposal seeks to determine the molecular mechanisms that control toxin synthesis in response to environmental signals. Candidate regulatory proteins, based on comparative genomics, will be specifically tested for their participation in such regulation. These proteins include CodY, CcpA and VirR, whose homologs in Bacillus subtilis or Clostridium perfringens have been shown to mediate the types of regulatory effects in question. In addition, general, unbiased searches for the relevant regulatory proteins will be carried out based on affinity chromatography. A fourth protein, TcdC, will be tested for its potential activity as an antagonist of TxeR. The project makes use of the expertise in C. difficile biochemistry, genetics and physiology of the three collaborating research groups and recent advances made by each of the groups in making this experimental system amenable to detailed molecular genetic analysis.
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Methods for gene cloning and targeted mutagenesis.
基因克隆和靶向突变的方法。
DOI:
10.1007/978-1-60327-365-7_12
发表时间:
2010
期刊:
Methods in molecular biology (Clifton, N.J.)
影响因子:
--
作者:
[Carter,GlenP, Lyras,Dena, Poon,Rachael, Howarth,PaulineM, Rood,JulianI]
通讯作者:
Rood,JulianI
DOI:
10.1093/nar/gks864
发表时间:
2012-11
期刊:
Nucleic acids research
影响因子:
14.9
作者:
[Antunes A, Camiade E, Monot M, Courtois E, Barbut F, Sernova NV, Rodionov DA, Martin-Verstraete I, Dupuy B]
通讯作者:
Dupuy B
DOI:
10.1371/journal.ppat.1002317
发表时间:
2011-10
期刊:
PLoS pathogens
影响因子:
6.7
作者:
[Carter GP, Douce GR, Govind R, Howarth PM, Mackin KE, Spencer J, Buckley AM, Antunes A, Kotsanas D, Jenkin GA, Dupuy B, Rood JI, Lyras D]
通讯作者:
Lyras D
DOI:
10.1038/nature07822
发表时间:
2009-04-30
期刊:
NATURE
影响因子:
64.8
作者:
[Lyras, Dena, O'Connor, Jennifer R., Howarth, Pauline M., Sambol, Susan P., Carter, Glen P., Phumoonna, Tongted, Poon, Rachael, Adams, Vicki, Vedantam, Gayatri, Johnson, Stuart, Gerding, Dale N., Rood, Julian I.]
通讯作者:
Rood, Julian I.
DOI:
10.3390/toxins8050153
发表时间:
2016-05-14
期刊:
Toxins
影响因子:
4.2
作者:
[Martin-Verstraete I, Peltier J, Dupuy B]
通讯作者:
Dupuy B
Meeting on the Pathogenesis of Clostridia
-
批准号:8596138
-
项目类别:
-
资助金额:$0.7万
-
财政年份:2013
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
Meeting on the Pathogenesis of Clostridia
-
批准号:8243975
-
项目类别:
-
资助金额:$1.2万
-
财政年份:2011
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
Isolation of Early Sporulation Genes
-
批准号:7904474
-
项目类别:
-
资助金额:$4.84万
-
财政年份:2009
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
Meeting on the Pathogenesis of Clostridia
-
批准号:7114530
-
项目类别:
-
资助金额:$0.8万
-
财政年份:2006
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
Clostridium difficile Toxin Gene Regulation
-
批准号:7331486
-
项目类别:
-
资助金额:$26.54万
-
财政年份:2004
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
Clostridium difficile Toxin Gene Regulation
-
批准号:6869008
-
项目类别:
-
资助金额:$31.71万
-
财政年份:2004
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
Clostridium difficile Toxin Gene Regulation
-
批准号:6993588
-
项目类别:
-
资助金额:$27.86万
-
财政年份:2004
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
Clostridium difficile Toxin Gene Regulation
-
批准号:7538342
-
项目类别:
-
资助金额:$29.31万
-
财政年份:2004
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
Clostridium difficile Toxin Gene Regulation
-
批准号:7154110
-
项目类别:
-
资助金额:$27.05万
-
财政年份:2004
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
Meeting on the Pathogenesis of Clostridia
-
批准号:6669954
-
项目类别:
-
资助金额:$1.0万
-
财政年份:2003
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
ISOLATION OF EARLY SPORULATION GENES
-
批准号:2181271
-
项目类别:
-
资助金额:$30.27万
-
财政年份:1989
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
ISOLATION OF EARLY SPORULATION GENES
-
批准号:3300745
-
项目类别:
-
资助金额:$17.5万
-
财政年份:1989
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
Isolation of Early Sporulation Genes
-
批准号:6725577
-
项目类别:
-
资助金额:$35.66万
-
财政年份:1989
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
Isolation of Early Sporulation Genes
-
批准号:7792461
-
项目类别:
-
资助金额:$35.12万
-
财政年份:1989
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
Integration of metabolism and virulence in Gram-positive bacteria
-
批准号:8293607
-
项目类别:
-
资助金额:$53.11万
-
财政年份:1989
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
Isolation of Early Sporulation Genes
-
批准号:6946330
-
项目类别:
-
资助金额:$35.66万
-
财政年份:1989
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
ISOLATION OF EARLY SPORULATION GENES
-
批准号:3300748
-
项目类别:
-
资助金额:$19.21万
-
财政年份:1989
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
ISOLATION OF EARLY SPORULATION GENES
-
批准号:3300746
-
项目类别:
-
资助金额:$18.18万
-
财政年份:1989
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
ISOLATION OF EARLY SPORULATION GENES
-
批准号:3300744
-
项目类别:
-
资助金额:$0.28万
-
财政年份:1989
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
ISOLATION OF EARLY SPORULATION GENES
-
批准号:2181270
-
项目类别:
-
资助金额:$28.85万
-
财政年份:1989
-
负责人:ABRAHAM Lincoln SONENSHEIN
-
依托单位:
海外基金