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中文摘要
翻译
高级生物信息学核心将分析和整合来自多个来源的数据,例如, 亲和纯化后质谱(AP-MS),染色质免疫沉淀 随后进行DNA测序(ChlP-Seq)、通过RNA-Seq进行基因表达和其他方法, 鉴定心脏分化中的生物学相关细胞通路和过程。它会让 使用新的程序,如MiST的AP-MS数据和其他算法开发的 Gladstone Bioinformatics Core准确分析ChIP-Seq和RNA-Seq数据。核心将 利用现有Gladstone生物信息学核心的专业知识,但专注于蛋白质-蛋白质 相互作用数据及其与其他基因调控数据集的整合,以建立组合 在心脏分化过程中控制基因表达的相互作用。
英文摘要
The Advanced Bioinformatics Core will analyze and integrate data from multiple sources, e.g., affinity purification followed by mass spectrometry (AP-MS), chromatin immunoprecipitation followed by DNA sequencing (ChlP-Seq), gene expression by RNA-Seq and other methods to identify biologically relevant cellular pathways and processes in cardiac differentiation. It will make use of novel programs such as MiST for AP-MS data and other algorithms developed by the Gladstone Bioinformatics Core to accurately analyze ChlP-Seq and RNA-Seq data. This core will leverage the expertise in the existing Gladstone Bioinformatics Core but focus on protein-protein interaction data and its integration with other gene regulatory datasets to establish combinatorial interactions that control gene expression during cardiac differentiation.
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Discovering human divergent activity-regulated elements using comparative, computational, and functional approaches
Linking microbiome genetic variants with cardiovascular phenotypes in 50,000 individuals
  • 批准号:
    10516693
  • 项目类别:
  • 资助金额:
    $70.73万
  • 财政年份:
    2022
  • 负责人:
    KATHERINE S. POLLARD
  • 依托单位:
Linking microbiome genetic variants with cardiovascular phenotypes in 50,000 individuals
  • 批准号:
    10672312
  • 项目类别:
  • 资助金额:
    $68.5万
  • 财政年份:
    2022
  • 负责人:
    KATHERINE S. POLLARD
  • 依托单位:
Core B: Integrative Data-Science Core
  • 批准号:
    10670335
  • 项目类别:
  • 资助金额:
    $63.77万
  • 财政年份:
    2021
  • 负责人:
    KATHERINE S. POLLARD
  • 依托单位:
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