Collaborative Research: Adaptive Testing and Rare-Event Analysis of High-Dimensional Data
Collaborative Research: Adaptive Testing and Rare-Event Analysis of High-Dimensional Data
批准号:
1712717
负责人:
Gongjun Xu
金额:
$12.0万
依托单位国家:
美国
项目类别:
Continuing Grant
财政年份:
2017
资助国家:
美国
项目状态:
已结题
起止时间:
2017-08-15 至 2020-07-31
中文摘要
该项目旨在为遗传学、基因组学和神经影像学中的高维数据开发适应性强的测试程序。由于近年来生物技术的进步,大量高通量和高维分子和成像数据被收集,导致了许多新的和具有挑战性的统计问题。一个问题是,如何使用全基因组关联研究(GWAS)中的多基因检测来回答数百万遗传变异中的一些是否与阿尔茨海默病等复杂疾病有关。这个问题的答案对于揭示疾病相关基因,从而制定有效的预防和治疗策略非常重要。注重严格的假设检验,以避免错误的发现,同时最大限度地提高真正发现的机会,这对现代遗传学、基因组学和其他基因组学研究至关重要。这些方法将应用于与阿尔茨海默病相关的数据,目前还没有治愈的方法,迫切需要更强大的分析方法来揭示潜在的生物学。研究生将参与计算工具的研究和开发,并将开发公开可用的软件包,供其他生物医学研究人员使用。本研究将推动现代统计方法在高维数据假设检验和相关罕见事件评估方面的前沿。在广义线性模型和高维协方差矩阵结构中测试高维平均参数的强大的自适应方法将被开发。自适应检验统计量是基于高维高阶von Mises v -统计量和u -统计量构建的,并将为灵活的渐近区域提供针对稀疏、密集以及中等稀疏或密集信号的一致的高功率。该研究的另一个重点是处理全基因组分子和神经影像学数据分析中具有挑战性和重要的罕见事件估计问题,通常需要高度严格的统计显著性水平。为了评估这种小概率,研究将导致理论尾概率近似以及使用非标准测量变化技术的有效蒙特卡罗方法。
英文摘要
This project aims at developing adaptively powerful testing procedures for high-dimensional data with applications in genetics, genomics and neuroimaging. Due to recent biotechnological advances, large amounts of high-throughput and high-dimensional molecular and imaging data have been collected, resulting in a number of new and challenging statistical questions. One question is how polygenic testing in genome-wide association studies (GWAS) may be used to answer whether some of the millions of genetic variants are associated with a complex disease like Alzheimer's disease. The answer to this question is important to uncovering disease-related genes, and thus developing effective prevention and treatment strategies. The focus on rigorous hypothesis testing to avoid false discoveries, while maximizing the chance for true discoveries, is critical to modern genetic, genomic and other omic studies. The methods will be applied to data related to Alzheimer's disease, for which currently there is no cure, and more powerful analysis methods are urgently needed to unravel the underlying biology. Graduate students will be involved in the conduct of the research and development of the computational tools, and publicly available software packages will be developed for use by other biomedical researchers.This research will advance the frontiers of modern statistical methodology in hypothesis testing with high-dimensional data and related rare event assessment. Powerful adaptive methods for testing high-dimensional mean parameters in generalized linear models as well as high-dimensional covariance matrix structures will be developed. The adaptive test statistics are constructed based on high-dimensional high-order von Mises V-statistics and U-statistics, and will provide uniformly high power against sparse, dense, as well as moderately sparse or dense signals for flexible asymptotic regimes. Another thrust of the research deals with the challenging and important rare-event estimation problem in analysis of genome-wide molecular and neuroimaging data, where a high stringent statistical significance level is usually needed. To evaluate such small probabilities, the research will lead to theoretical tail probability approximations as well as efficient Monte Carlo methods using non-standard change-of-measure techniques.
期刊论文(24)
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DOI:
10.1080/01621459.2018.1558062
发表时间:
2019
期刊:
Journal of the American Statistical Association
影响因子:
3.7
作者:
[Wang, Jingshen, He, Xuming, Xu, Gongjun]
通讯作者:
Xu, Gongjun
DOI:
10.5705/ss.202021.0350
发表时间:
2019-06
期刊:
Statistica Sinica
影响因子:
1.4
作者:
[Yuqi Gu;Gongjun Xu]
通讯作者:
Yuqi Gu;Gongjun Xu
DOI:
10.1111/bmsp.12219
发表时间:
2020
期刊:
British Journal of Mathematical and Statistical Psychology
影响因子:
2.6
作者:
[Cho, April E., Wang, Chun, Zhang, Xue, Xu, Gongjun]
通讯作者:
Xu, Gongjun
DOI:
10.1017/jpr.2018.11
发表时间:
2018
期刊:
Journal of Applied Probability
影响因子:
1
作者:
[Li, Xiaoou, Xu, Gongjun]
通讯作者:
Xu, Gongjun
Transformed Dynamic Quantile Regression on Censored Data
截尾数据的变换动态分位数回归
DOI:
10.1080/01621459.2019.1695623
发表时间:
2020
期刊:
Journal of the American Statistical Association
影响因子:
3.7
作者:
[Chu, Chi Wing, Sit, Tony, Xu, Gongjun]
通讯作者:
Xu, Gongjun
共 16 条
CAREER: Identifiability and Inferences for Structured Latent Attribute Models
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批准号:1846747
-
项目类别:Continuing Grant
-
资助金额:$43.49万
-
财政年份:2019
-
负责人:Gongjun Xu
-
依托单位:
Cognitive Diagnosis Models: Identifiability, Estimation, and Applications
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批准号:1659328
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项目类别:Standard Grant
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资助金额:$21.5万
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财政年份:2017
-
负责人:Gongjun Xu
-
依托单位:
国内基金
海外基金
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