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Molecular Structures of Interfacial Proteins Studied by Isotope Labeling and Sum Frequency Generation Vibrational Spectroscopy

Molecular Structures of Interfacial Proteins Studied by Isotope Labeling and Sum Frequency Generation Vibrational Spectroscopy
同位素标记和和频振动光谱研究界面蛋白的分子结构
批准号:
1904380
负责人:
Zhan Chen
金额:
$45.0万
依托单位国家:
美国
项目类别:
Continuing Grant
财政年份:
2019
资助国家:
美国
项目状态:
已结题
起止时间:
2019-09-01 至 2024-02-29

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项目成果

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中文摘要
翻译
在化学系化学测量和成像项目的支持下,密歇根大学的Zhan Chen教授和他的团队正在开发一种创新的方法来阐明表面结合蛋白质的详细分子结构。 他们的方法使用选择性重原子(同位素)标记和先进的光谱方法来获得关于蛋白质在界面上的吸附如何影响其结构和功能的关键知识。 这些相互作用影响了一系列应用,例如生物医学材料的生物相容性,生物涂层的性能,生物传感器的选择性和灵敏度以及生物燃料电池的效率。这种高度跨学科的研究为研究生和本科生提供了教育机会。 陈教授和他的学生还致力于吸引高中生(包括那些来自代表性不足的群体,包括女性),并通过每年夏天教授的课程来提高他们对科学的兴趣。该项目的重点是开发一种普遍适用的方法来表征蛋白质的构象和取向的接口使用同位素标记和和频率产生(SFG)振动光谱。利用模型细胞膜相关的抗菌肽tachyplesin I,一种可以在石墨烯界面保留其天然结构的蛋白质GB 1突变体,以及一种在石墨烯上变性的野生型蛋白质GB 1,陈教授及其团队正在开发SFG同位素标记方法,以表征固/液界面处的各种蛋白质二级结构;从界面相互作用引起的晶体结构中推断界面蛋白的取向和轻微的构象变化;并确定变性界面蛋白的构象。从分子动力学模拟和哈密顿方法获得的结果进行比较,从同位素标记的蛋白质,以确定最有可能的蛋白质的构象和取向的接口实验测得的SFG数据。该方法还可用于确定未知晶体结构的蛋白质的界面结构,为研究界面生物分子添加了强大的光谱工具。该奖项反映了NSF的法定使命,并通过使用基金会的知识价值和更广泛的影响审查标准进行评估,被认为值得支持。
英文摘要
With support from the Chemical Measurement and Imaging Program in the Division of Chemistry, Professor Zhan Chen and his group at the University of Michigan are developing an innovative approach to elucidate detailed molecular structures of surface-bound proteins. Their approach uses selective heavy-atom (isotope) labeling and advanced spectroscopic methods to derive crucial knowledge about how adsorption of proteins at interfaces affects their structure and function. These interactions impact a range of applications, such as biocompatibility of biomedical materials, performance of antifouling coatings, selectivity and sensitivity of biosensors, and efficiency of biofuel cells. This highly interdisciplinary research provides educational opportunities for graduate and undergraduate students. Professor Chen and his students are also working to engage high school students (including those from underrepresented groups, including women) and to enhance their interest in science through a class taught each summer. This project focuses on the development of a generally applicable methodology to characterize the conformation and orientation of proteins at interfaces using isotope labeling and sum frequency generation (SFG) vibrational spectroscopy. Using a model cell membrane-associated antimicrobial peptide tachyplesin I, a protein GB1 mutant which can retain its native structure at the graphene interface, and a wild-type protein GB1 which denatures on graphene, Professor Chen and his group are developing SFG isotope labeling methods to characterize various protein secondary structures at the solid/liquid interface; to deduce orientations and slight conformation changes of interfacial proteins from crystal structures due to interfacial interactions; and to determine conformations of denatured interfacial proteins. Results obtained from molecular dynamics simulations and the Hamiltonian approach are compared to the experimentally measured SFG data from isotopically labeled proteins to determine the most likely protein conformations and orientations at the interface. This method can also be used to determine interfacial structures of proteins with unknown crystal structures, adding a powerful spectroscopic tool for studying interfacial biological molecules.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
期刊论文(7)
专著(0)
科研奖励(0)
会议论文
DOI: 10.1116/6.0001859
发表时间: 2022-05-01
期刊: BIOINTERPHASES
影响因子: 2.1
作者: [Chen, Zhan]
通讯作者: Chen, Zhan
DOI: 10.1021/acs.jpclett.1c02956
发表时间: 2021-10-12
期刊: JOURNAL OF PHYSICAL CHEMISTRY LETTERS
影响因子: 5.7
作者: [Guo, Wen, Lu, Tieyi, Chen, Zhan]
通讯作者: Chen, Zhan
DOI: 10.1021/acs.jpcb.1c03849
发表时间: 2021-07-13
期刊: JOURNAL OF PHYSICAL CHEMISTRY B
影响因子: 3.3
作者: [Guo, Wen, Zou, Xingquan, Chen, Zhan]
通讯作者: Chen, Zhan
Collaborative Research: A new diffuse-interface approach to ensemble average solvation energy: modeling, analysis and computation
A Novel Computational Method for Diffuse Interface Models of Implicit Solvation of Biomolecules
Molecular Level Studies on Phthalates at Interfaces Using Nonlinear Optical Spectroscopic Techniques
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