Response of soil microbial community to exposure of environmental pollutants
Response of soil microbial community to exposure of environmental pollutants
批准号:
22380176
负责人:
TSUDA Masataka
金额:
$11.65万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2010
资助国家:
日本
项目状态:
已结题
起止时间:
2010 至 2012
中文摘要
土壤微生物群落在化学污染物的生物修复中起着非常重要的作用。为了研究该群落对污染物的响应和降解情况,通过对该群落进行宏基因组测序,并结合能够降解污染物的基因和菌株的分离和表征,对人工污染和封闭土壤系统中的该群落进行了时间序列分析。我们的分析有力地提示了参与污染土壤生物修复的关键分解代谢基因及其宿主属。
英文摘要
Soil microbial communities play very important role in the bioremediation of chemical pollutants. To investigate how such a community responded to and degrade the pollutants, time series analysis of the community in an artificially polluted and closed soil system was carried out by metagenomic sequencing of the community in conjunction with the isolation and characterization of the genes and bacterial strains able to degrade the pollutants. Our analysis strongly suggested the crucial catabolic genes and their host genera involved in the bioremediation in the polluted soil.
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Meta-plasmid : In silico reconstruction of a plasmid-like circular DNA molecule and its possible role in the retrieved environment
后质质粒:类质粒环状 DNA 分子的计算机重建及其在恢复环境中的可能作用
DOI:
--
发表时间:
2010
期刊:
影响因子:
--
作者:
[H. Suenaga, 5 人, Y. Ohtsubo, M. Tsuda, and K. Miyazaki, 津田雅孝,加藤広海,大坪嘉行,永田裕二, 加藤広海, 西山依里, 木村明音, 菅原智詞, 千本木淳子, 大坪嘉行, 宮腰昌利, H.Suenaga]
通讯作者:
H.Suenaga
メタゲノムデータベース,メタゲノム解析技術の最前線
宏基因组数据库,最前沿的宏基因组分析技术
DOI:
--
发表时间:
2010
期刊:
影响因子:
--
作者:
[H. Suenaga, 5 人, Y. Ohtsubo, M. Tsuda, and K. Miyazaki, 津田雅孝,加藤広海,大坪嘉行,永田裕二, 加藤広海, 西山依里, 木村明音, 菅原智詞, 千本木淳子, 大坪嘉行, 宮腰昌利, H.Suenaga, A.Kimura, Y.Ohtsubo, 小川直人, 加藤広海, Yoshiyuki Ohtsubo, 森宙史,丸山史人,黒川顕, 森宙史,丸山史人,黒川顕]
通讯作者:
森宙史,丸山史人,黒川顕
Time series metagenomic analysis of soil microbial community
土壤微生物群落时间序列宏基因组分析
DOI:
--
发表时间:
2013
期刊:
影响因子:
--
作者:
[Iwano, H., Higuchi, H., Inoue, H., Kobayashi, H., Nagahata, H., Yokota, H., Tanji, Y., Tamura, Y., M. Morikawa, 津田雅孝, 岩野英知, Yoshie Kametani, M.Morikawa, 岩野英知, M. Tsuda and K. Kurokawa]
通讯作者:
M. Tsuda and K. Kurokawa
Pivotal role of anthranilate dioxygenase genes in the adaptation of Burkholderia multivorans ATCC 17616 in soil
邻氨基苯甲酸双加氧酶基因在多食伯克霍尔德菌 ATCC 17616 适应土壤中的关键作用
DOI:
--
发表时间:
2012
期刊:
FEMS Microbiol.Lett.
影响因子:
--
作者:
[Higuchi, H., Iwano, H., Kawai, K., Ohta, T., Obayashi, T., Hirose, K., Itoh, N., Yokota, T., Tamura, Y., Nagahata, H., 佐伯和利・國頭恭・境雅夫, E.Nishiyama]
通讯作者:
E.Nishiyama
The lin genes for γ-hexachlorocyclohexane degradation in Sphingomonas sp.MM-1 proven to be dispersed across multiple plasmids
鞘氨醇单胞菌 MM-1 中 γ-六氯环己烷降解的 lin 基因被证明分散在多个质粒中
DOI:
--
发表时间:
2011
期刊:
Biosci.Biotech.Biochem.
影响因子:
--
作者:
[Tsuchiya, K., Kurose, D., Shaw, R.H., Djeddour, D.H., Evans, H.C., Tsushima, S., Furuya, N., M.Tabata]
通讯作者:
M.Tabata
共 98 条
Bacterial genetic determinants that control horizontal transfer of genes for degradation of environmental pollutants
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批准号:23658268
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项目类别:Grant-in-Aid for Challenging Exploratory Research
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资助金额:$2.5万
-
财政年份:2011
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负责人:TSUDA Masataka
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依托单位:
Horizontal transfer of bacterial genes for degradation of environmental pollutants
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批准号:18380189
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$10.92万
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财政年份:2006
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负责人:TSUDA Masataka
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依托单位:
Innovative genomics and metagenomics of environmental bacteria able to degrade organic pollutants
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批准号:17018003
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项目类别:Grant-in-Aid for Scientific Research on Priority Areas
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资助金额:$69.89万
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财政年份:2005
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负责人:TSUDA Masataka
-
依托单位:
Identification and characterizatioon of mobile genetic elements carrying xenobiotics-degrading genes from soil bacteria
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批准号:12558065
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$8.26万
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财政年份:2000
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负责人:TSUDA Masataka
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依托单位:
Study on Iron Regulon in Pseudomonas aeruginosa
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批准号:11670257
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$2.3万
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财政年份:1999
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负责人:TSUDA Masataka
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依托单位:
Regulatory Mechanism for Expression of Genes for Iron Uptake in Pseudomonas aeruginosa
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批准号:07670314
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$1.47万
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财政年份:1995
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负责人:TSUDA Masataka
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依托单位:
Study on Iron Regulon Pseudomonas aeruginosa
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批准号:05670258
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项目类别:Grant-in-Aid for General Scientific Research (C)
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资助金额:$1.34万
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财政年份:1993
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负责人:TSUDA Masataka
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依托单位:
海外基金