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High Performance Computing Cluster for Biomedical Research at VCU

High Performance Computing Cluster for Biomedical Research at VCU
VCU 生物医学研究高性能计算集群
批准号:
7794505
负责人:
MENG CUI
金额:
$41.69万
依托单位国家:
美国
项目类别:
财政年份:
2010
资助国家:
美国
项目状态:
已结题
起止时间:
2010-06-15 至 2013-06-14

项目摘要

项目成果

MENG CUI的其他基金

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中文摘要
翻译
描述(由申请人提供):本申请的目的是提高弗吉尼亚联邦大学(VCU)的计算能力,并使VCU MCV校区的研究人员和学生受益,他们对使用先进的计算方法在原子水平上研究大分子结构和功能之间的关系感兴趣。我们希望获得一个新的高性能计算集群(HPCC),以满足快速增长的任务需求,如分子建模和模拟,计算结构生物学,生物信息学,核磁共振和x射线晶体学。通过使用这种最先进的计算设备,科学家可以大大加快他们的研究,降低湿实验室实验的成本,缩短疾病药物发现的周期。通过开发和共享这个计算设施,一组研究人员将建立一个环境,以培养成员之间的合作,并加强VCU的跨学科研究工作。这个设施也可以成为吸引新的研究人员丰富VCU生物医学研究的资源。
英文摘要
DESCRIPTION (provided by applicant): The goal of this application is to enhance the computational capabilities at Virginia Commonwealth University (VCU), and benefit the researchers and students on the MCV Campus of VCU, who are interested in using advanced computational methods to investigate the relationship between structure and function of macromolecules at the atomic level. We wish to acquire a new High Performance Computing Cluster (HPCC) to meet a rapidly growing demand for tasks such as molecular modeling and simulation, computational structural biology, bioinformatics, NMR, and X-ray crystallography. By using this state-of-the-art computational facility, scientists can dramatically accelerate their research, reduce the costs for wet-lab experiments, and shorten the period of drug discovery for diseases. By developing and sharing this computational facility a team of investigators will build an environment to nurture collaborations between members and enhance an interdisciplinary research effort at VCU. This facility could also become a resource to attract new investigators to enrich biomedical research at VCU. PUBLIC HEALTH RELEVANCE: Modern biomedical research strongly depends on high-performance computing and powerful computational resources. Advanced computational simulations will help scientists explore the relationship between structure and function of macromolecules at the atomic level, and accelerate the process of structure-based drug discovery for prevention or cure of human diseases.
期刊论文(10)
专著(0)
科研奖励(0)
会议论文
Computerized Molecular Modeling for Discovering Promising Glycosaminoglycan Oligosaccharides that Modulate Protein Function.
用于发现有前景的调节蛋白质功能的糖胺聚糖寡糖的计算机分子模型。
DOI: 10.1007/978-1-0716-1398-6_41
发表时间: 2022
期刊: Methods in molecular biology (Clifton, N.J.)
影响因子: --
作者: [Sankaranarayanan,NehruViji, Desai,Umesh]
通讯作者: Desai,Umesh
DOI: 10.1016/j.brainres.2017.03.009
发表时间: 2017-05-15
期刊: Brain research
影响因子: 2.9
作者: [Marmolejo-Murillo LG, Aréchiga-Figueroa IA, Cui M, Moreno-Galindo EG, Navarro-Polanco RA, Sánchez-Chapula JA, Ferrer T, Rodríguez-Menchaca AA]
通讯作者: Rodríguez-Menchaca AA
DOI: 10.1042/bj20150059
发表时间: 2015-11-15
期刊: The Biochemical journal
影响因子: --
作者: [Joseph PR, Mosier PD, Desai UR, Rajarathnam K]
通讯作者: Rajarathnam K
Toward a robust computational screening strategy for identifying glycosaminoglycan sequences that display high specificity for target proteins.
制定稳健的计算筛选策略,用于识别对靶蛋白表现出高特异性的糖胺聚糖序列。
DOI: 10.1093/glycob/cwu077
发表时间: 2014
期刊: Glycobiology
影响因子: 4.3
作者: [Sankaranarayanan,NehruViji, Desai,UmeshR]
通讯作者: Desai,UmeshR
共 6 条
    Molecular mechanism of the bitter taste of HIV/AIDS drugs and its inhibition
    • 批准号:
      10548006
    • 项目类别:
    • 资助金额:
      $19.63万
    • 财政年份:
      2022
    • 负责人:
      MENG CUI
    • 依托单位:
    Molecular mechanism of the bitter taste of HIV/AIDS drugs and its inhibition
    • 批准号:
      10656567
    • 项目类别:
    • 资助金额:
      $23.55万
    • 财政年份:
      2022
    • 负责人:
      MENG CUI
    • 依托单位:
    Modeling Sweet Protein-Receptor Interactions
    MECHANISM OF AGONISM-ANTAGONISM OF SWEET TASTE RECEPTORS
    • 批准号:
      7956118
    • 项目类别:
    • 资助金额:
      $0.08万
    • 财政年份:
      2009
    • 负责人:
      MENG CUI
    • 依托单位:
    海外基金