CORE B: High-throughput Genomic and RNA Analysis
CORE B: High-throughput Genomic and RNA Analysis
批准号:
8382000
负责人:
Lisa D White
金额:
$28.56万
依托单位国家:
美国
项目类别:
财政年份:
--
资助国家:
美国
项目状态:
未结题
起止时间:
至
关键词:
AchievementAdvertisementsAgar Gel ElectrophoresisAlternative SplicingApoptosisArchivesBase SequenceBioconductorBioinformaticsBiologicalBiological AssayBiological SciencesBudgetsCellsChadChromosomesClinicalCollaborationsColorCommunitiesComplementary DNAComplexComputer softwareComputersConsultationsCore FacilityCoupledCustomDNADNA FingerprintingDNA-Protein InteractionDataData AnalysesDatabasesDevelopmentDevelopmental DisabilitiesDisciplineDiseaseEducational workshopEnvironmentEpigenetic ProcessExonsExperimental DesignsExpressed Sequence TagsFacultyFellowshipFundingGene ChipsGene ExpressionGene Expression ProfileGene Expression ProfilingGenesGenetic Predisposition to DiseaseGenomeGenomicsGenotypeGlassHourHousingHumanHuman CloningHuman GeneticsHuman GenomeHuman ResourcesImageIndividualInstructionIntellectual functioning disabilityLabelLaboratoriesLinkMachine LearningMalignant NeoplasmsMapsMathematicsMeasurementMeasuresMedical GeneticsMedical StudentsMedicineMental Retardation and Developmental Disabilities Research CentersMethodologyMethodsMethylationMicroRNAsMicroarray AnalysisModelingMolecularMolecular GeneticsMolecular ProfilingMusNamesNational Cancer InstituteNational Eye InstituteNeurologicNucleic AcidsOligonucleotidesOnline SystemsPancreasPathway AnalysisPathway interactionsPediatric HospitalsPhysicsPositioning AttributePostdoctoral FellowPriceProteinsProviderPublicationsQuality ControlRNARNA SequencesRNA analysisRattusReactionResearchResearch ActivityResearch InstituteResearch PersonnelResourcesRetinaRibosomesRiceSNP genotypingSamplingSequence AnalysisServicesSignal TransductionSiliconSpottingsStudentsSystemSystems AnalysisTechnologyTestingTexasTimeTrainingTranscriptUniversitiesWorkbasechromatin remodelingcollegecomparative genomic hybridizationcomputer sciencecytokinedata managementdesigndigitalgenome sequencinggraduate studentgraspinstrumentinterestknowledge basemRNA Expressionmeetingsmembermicro-total analysis systemnano-stringnext generationnovelpromoterquality assurancerepositoryresearch studysingle moleculetooltranscriptomicsweb site
中文摘要
贝勒医学院的高通量基因组和RNA分析(HGRA)核心
(BCM)智力和发育障碍研究中心(IDDRC)利用资源
和BCM的微阵列核心设施(MCF)的知识库。这个新命名的核心
代表两个先前资助的IDDRC核心的组合(核心B2:基因组阵列核心
和核心C4:表达式数组核心)。作为一项新的活动,CORE还将提供下一代
向用户提供测序技术。基因组阵列核心最初是为了提供阵列
BCM-IDDRC使用者的比较基因组杂交(ACGH)。从那时起,BCM
医学遗传学实验室(CLIA认证的实验室环境)开发了一种靶向aCGH
该平台被称为染色体微阵列分析(CMA)。2006年,丽莎·D·怀特博士
成为CLIA CMA实验室的技术总监,许多BCM-IDDRC的研究人员开始
利用那个实验室进行aCGH。向CLIA实验室的转换取得了惊人的成功,
对IDD社区有巨大的好处,从列出的大量出版物中就可以看出
下面。这些努力已经导致了大量新的IDD基因病因。这个
HGRA将继续将aCGH作为BCM-IDDRC成员的研究活动作为
作为临床工作的补充。
HGRA核心将结合尖端技术,提供最先进的质量
基于微阵列和基于下一代测序的服务和分析
转录和基因组图谱。MCF成立于1999年,资金来自BCM,
国家癌症研究所和国家眼科研究所为BCM开发微阵列资源
研究人员。随着HGRA核心的重组,我们的目标扩展到提供
协助BCM-IDDRC研究人员利用下一代微阵列技术
测序技术,良好的实验设计,数据管理和数据分析
资源。我们将开始提供下一代测序技术(Illumina Genome
分析器II)于2009年3月提交给BCM-IDDRC成员。
英文摘要
The High-throughput Genomic and RNA Analysis (HGRA) Core for the Baylor College of Medicine
(BCM) Intellectual and Developmental Disabilities Research Center (IDDRC) utilizes the resources
and knowledge base of the Microarray Core Facility (MCF) at BCM. This newly named core
represents a combination of two previously funded IDDRC cores (Core B2: Genomic Array Core
and Core C4: Expression Array Core). As a new activity, the core will also offer next generation
sequencing technology to users. Originally the Genomic Array Core was set up to offer array
comparative genomic hybridization (aCGH) to users of the BCM-IDDRC. Since that time the BCM
Medical Genetics Laboratories (a CLIA certified lab environment) developed a targeted aCGH
platform which is called Chromosomal Microarray Analysis (CMA). In 2006, Dr. Lisa D. White
became Technical Director of the CLIA CMA lab and many of the BCM-IDDRC researchers began
using that laboratory for their aCGH. The switch to the CLIA lab has been stunningly successful and
of immense benefit to the IDD community as illustrated by the large numbers of publications listed
below. A very large number of new genetic etiologies for IDD have resulted from these efforts. The
HGRA will continue to offer aCGH as a research activity for members of the BCM-IDDRC as an
adjunct to the clinical efforts.
The HGRA core will combine cutting edge technologies to provide state-of-the-art quality
microarray-based and next generation sequencing-based services and analyses for both
transcriptional and genomic profiling. The MCF was established in 1999 with funds from BCM, the
National Cancer Institute and the National Eye Institute to develop microarray resources for BCM
researchers. With the restructuring of the HGRA core, our purpose expands to providing
assistance to BCM-IDDRC researchers in utilizing microarray technology, next generation
sequencing technology, good experimental design, and data management and data analysis
resources. We will begin offering next generation sequencing technology (Illumina Genome
Analyzer II) to BCM-IDDRC members in March 2009.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
GENOMICS PROFILING
-
批准号:8180982
-
项目类别:
-
资助金额:$16.58万
-
财政年份:2010
-
负责人:Lisa D White
-
依托单位:
Genomic Profiling Resource
-
批准号:7514637
-
项目类别:
-
资助金额:$11.28万
-
财政年份:2007
-
负责人:Lisa D White
-
依托单位:
Shared Resource: Genomic and RNA Profiling
-
批准号:8934790
-
项目类别:
-
资助金额:$23.21万
-
财政年份:--
-
负责人:Lisa D White
-
依托单位:
CORE B: High-throughput Genomic and RNA Analysis
-
批准号:7759244
-
项目类别:
-
资助金额:$27.92万
-
财政年份:--
-
负责人:Lisa D White
-
依托单位:
CORE B: High-throughput Genomic and RNA Analysis
-
批准号:8508976
-
项目类别:
-
资助金额:$13.53万
-
财政年份:--
-
负责人:Lisa D White
-
依托单位:
CORE B: High-throughput Genomic and RNA Analysis
-
批准号:8318644
-
项目类别:
-
资助金额:$28.45万
-
财政年份:--
-
负责人:Lisa D White
-
依托单位:
GENOMICS PROFILING
-
批准号:8296123
-
项目类别:
-
资助金额:$15.01万
-
财政年份:--
-
负责人:Lisa D White
-
依托单位:
Shared Resource: Genomic and RNA Profiling
-
批准号:9759798
-
项目类别:
-
资助金额:$20.75万
-
财政年份:--
-
负责人:Lisa D White
-
依托单位:
Genomic Profiling Resource
-
批准号:7664867
-
项目类别:
-
资助金额:$11.43万
-
财政年份:--
-
负责人:Lisa D White
-
依托单位:
Genomic Profiling Resource
-
批准号:7900429
-
项目类别:
-
资助金额:$13.15万
-
财政年份:--
-
负责人:Lisa D White
-
依托单位:
GENOMICS PROFILING
-
批准号:8690552
-
项目类别:
-
资助金额:$13.59万
-
财政年份:--
-
负责人:Lisa D White
-
依托单位:
GENOMICS PROFILING
-
批准号:8515958
-
项目类别:
-
资助金额:$20.72万
-
财政年份:--
-
负责人:Lisa D White
-
依托单位:
GENOMICS PROFILING
-
批准号:8376822
-
项目类别:
-
资助金额:$14.65万
-
财政年份:--
-
负责人:Lisa D White
-
依托单位:
CORE B: High-throughput Genomic and RNA Analysis
-
批准号:8134786
-
项目类别:
-
资助金额:$28.42万
-
财政年份:--
-
负责人:Lisa D White
-
依托单位:
海外基金