Tailoring the Hydroxyl Radical Foot-Printing Approach to Provide a Solution for the Higher Order Structural Analysis Needs of the Biopharmaceutical Industry
Tailoring the Hydroxyl Radical Foot-Printing Approach to Provide a Solution for the Higher Order Structural Analysis Needs of the Biopharmaceutical Industry
批准号:
9902463
负责人:
Scot Randy Weinberger
金额:
$99.66万
依托单位国家:
美国
项目类别:
财政年份:
2017
资助国家:
美国
项目状态:
已结题
起止时间:
2017-09-01 至 2021-12-31
关键词:
3-DimensionalAddressAdoptionAdverse Drug Experience ReportAntibody Binding SitesAppearanceAutomationBiological ProductsBiological Response Modifier TherapyCellsCessation of lifeChemicalsClientComparative StudyComplexComputer softwareConsequentialismCritiquesCustomDangerousnessDevelopmentDevicesEnvironmentEpitope MappingFee-for-Service PlansFeedbackGoalsGovernmentGuidelinesHigher Order Chromatin StructureHydroxyl RadicalImmune responseIndustryInterventionLabelLaboratoriesLasersLettersLinkMainstreamingMaintenanceMethodsMicrofluidicsMonitorMorbidity - disease rateNatureOpticsPatientsPharmaceutical PreparationsPharmacologyPhasePlayPreparationProcessProductionProtein AnalysisProtein FootprintingProteinsReactionReagentReproducibilityResearchRiskRoleSafetySalesSamplingSmall Business Innovation Research GrantStructural defectStructureSystemTechniquesTechnologyTimeUltraviolet Raysadalimumabadverse drug reactionanalytical toolautomated analysisbasecombatcomputerized data processingcostcost effectivedesigndosimetryexperimental studyimprovedinfliximabinnovationinstrumentinstrumentationinterestirradiationirritationnew technologynoveloxidationphotolysisprogramsprotein structureprototyperesearch and developmenttool
中文摘要
名为“剪裁羟基自由基”的GenNext阶段II SBIR产品
为高阶结构分析提供解决方案的脚印方法
生物制药业的需求“是对已知的
用于高阶结构分析的新的和改进的工具
生物制药公司。与传统药物不同,生物制药是复杂的,
三维生物分子的非均相混合物,其安全性和有效性是
依赖适当的居屋计划。存在具有不正确高阶结构的蛋白质
(HOS)与严重的药物不良反应有关,这提醒了生物制药公司
业界对居者有其屋计划的关键作用,同时确立需要新的和改善的
Hos Analytics。
一种新兴的HOS分析技术是羟基自由基足迹法(HRPF)。
HRPF涉及通过与羟基反应对蛋白质外部进行不可逆标记
自由基与随后的MS分析以确定蛋白质的外部部分。这个
最广泛使用的产生OH自由基的方法使用快速爆发的紫外光,
并被恰当地称为蛋白质的快速光化学氧化(FPOP)。通常,一个
使用强大而昂贵的紫外光激光器。学术实验室已经证明了
FPOP在HOS分析中的应用;然而,在制药领域的采用一直很少
最好的。我们已经确定了限制#年采用HRPF方法的障碍。
生物制药行业。这些障碍包括:1)使用昂贵的
需要大量安全预防措施的激光;以及2)FPOP的不可复现性
由背景清除OH自由基引起的,这使比较复杂并限制了
学习。因此,目前还没有商业化的FPOP样品制备设备
分析,尽管证明需要居屋的分析能力。
GenNext建议创建了一种改进的执行HRPF分析的方法
通过用闪光氧化系统取代昂贵、危险的激光。此外,一个
将包括定制的内部标准(剂量测定)系统,以便于使用和
提高再现性。这些创新的进步将降低
采用HRPF进行居屋分析,并将加快采用
随之而来的对生物制药研发的影响。除了……之外
仪器销售,GenNext将为希望
在评估福克斯居屋计划对他们计划的影响时,限制前期成本和风险。
英文摘要
The GenNext Phase II SBIR submssion entitled “Tailoring the Hydroxy Radical
Foot-Printing Approach to Provide a Solution for the Higher Order Structural Analysis
Needs of the Biopharmaceutical Industry” is responsive to the ackowledged need for
new and improved tools for higher order structural analysis (HOS) of
biopharmaceuticals. Unlike conventional drugs, biopharmaceuticals are complex,
heterogeneous mixtures of 3-dimensional biomolecules, whose safety and efficacy is
reliant upon proper HOS. The presence of proteins with improper higher order structure
(HOS) has been linked to severe adverse drug reactions, alerting the biopharmaceutical
industry to the critical role of HOS, while establishing the need for new and improved
HOS analytics.
An emerging HOS analysis technique is hydroxyl radical foot-printing (HRPF).
HRPF involves the irreversible labeling of a protein’s exterior by reaction with hydroxyl
radicals with subsequent MS analysis to identify the outer portions of the protein. The
most widely used method for generating OH radicals employs a quick burst of UV light,
and is appropriately called fast photochemical oxidation of proteins (FPOP). Typically, a
powerful and expensive UV laser is used. Academic laboratories have demonstrated the
utility of FPOP for HOS analysis; however adoption in pharma has been minuscule at
best. We have identified barriers that have limited the adoption of the HRPF approach in
the biopharmaceutical industry. These impediments include: 1) The use of expensive
lasers that demand substantial safety precautions; and 2) the irreproducibility of FPOP
caused by background scavenging of OH radicals that complicate and limit comparative
studies. As such, there are no commercial sample preparation devices for FPOP
analysis, despite the demonstrated need for the HOS analytical power.
The GenNext proposal creates an improved means of performing HRPF analysis
by replacing expensive, hazardous lasers with a flash oxidation system. Moreover, a
custom internal standard (dosimetry) system will be included to facilitate ease of use and
improve reproducibility. These innovative advancements will decrease the barrier to
adoption of HRPF for HOS analysis and will result in accelerated adoption with
concomitant impact on biopharmaceutical research and development. In addition to
instrumentation sales, GenNext will offer a fee-for-service option for its clients who wish
to constrain upfront cost and risk, as they evaluate FOX HOS impact to their program.
期刊论文(1)
专著(0)
科研奖励(0)
会议论文
DOI:
10.3791/61861
发表时间:
2021-06-04
期刊:
Journal of visualized experiments : JoVE
影响因子:
--
作者:
[Weinberger SR, Chea EE, Sharp JS, Misra SK]
通讯作者:
Misra SK
Liquid Chromatography Flash Oxidation (LC-Fox™) Protein Footprinting System
-
批准号:10698726
-
项目类别:
-
资助金额:$35.0万
-
财政年份:2023
-
负责人:Scot Randy Weinberger
-
依托单位:
Multi-Wavelength Fluorescence Radical Dosimetry for Real-Time Assessment of Protein Footprinting Radical Yield
-
批准号:10250755
-
项目类别:
-
资助金额:$25.14万
-
财政年份:2021
-
负责人:Scot Randy Weinberger
-
依托单位:
In-cell Automated Flash Oxidation (IC-AutoFox™) Protein Footprinting System
-
批准号:10589128
-
项目类别:
-
资助金额:$116.54万
-
财政年份:2020
-
负责人:Scot Randy Weinberger
-
依托单位:
In-cell Automated Flash Oxidation (IC-AutoFox™) Protein Footprinting System
-
批准号:10478371
-
项目类别:
-
资助金额:$133.46万
-
财政年份:2020
-
负责人:Scot Randy Weinberger
-
依托单位:
In-Cell Radical Dosimetry (ICRD) for improved in vivo Fast Photo-oxidation of Proteins Hydroxyl Radical Protein Footprinting
-
批准号:10009765
-
项目类别:
-
资助金额:$26.15万
-
财政年份:2020
-
负责人:Scot Randy Weinberger
-
依托单位:
Software for Determining Proteoform Heterogeneity and Protein Expression Fidelity
-
批准号:10379422
-
项目类别:
-
资助金额:$64.34万
-
财政年份:2019
-
负责人:Scot Randy Weinberger
-
依托单位:
Software for Determining Proteoform Heterogeneity and Protein Expression Fidelity
-
批准号:10257385
-
项目类别:
-
资助金额:$48.05万
-
财政年份:2019
-
负责人:Scot Randy Weinberger
-
依托单位:
Software for Determining Proteoform Heterogeneity and Protein Expression Fidelity
-
批准号:10582584
-
项目类别:
-
资助金额:$59.16万
-
财政年份:2019
-
负责人:Scot Randy Weinberger
-
依托单位:
FoxWare™, An Advanced Data Analysis Package for Hydroxyl Radical Foot-Printing Higher Order Structural Analysis
-
批准号:10092185
-
项目类别:
-
资助金额:$49.22万
-
财政年份:2018
-
负责人:Scot Randy Weinberger
-
依托单位:
FoxWare™, An Advanced Data Analysis Package for Hydroxyl Radical Foot-Printing Higher Order Structural Analysis
-
批准号:10334462
-
项目类别:
-
资助金额:$47.08万
-
财政年份:2018
-
负责人:Scot Randy Weinberger
-
依托单位:
FoxWare™, An Advanced Data Analysis Package for Hydroxyl Radical Foot-Printing Higher Order Structural Analysis
-
批准号:9907677
-
项目类别:
-
资助金额:$47.72万
-
财政年份:2018
-
负责人:Scot Randy Weinberger
-
依托单位:
Tailoring the Hydroxyl Radical Footprinting Approach to Provide a Solution for the Higher Order Structural Analytical Needs of the Biopharmaceutical Industry
-
批准号:9408491
-
项目类别:
-
资助金额:$22.5万
-
财政年份:2017
-
负责人:Scot Randy Weinberger
-
依托单位:
High Throughput, Label-Fee Molecular Interaction Platform for Membrane Protein Ta
-
批准号:8201152
-
项目类别:
-
资助金额:$126.06万
-
财政年份:2010
-
负责人:Scot Randy Weinberger
-
依托单位:
High Throughput, Label-Fee Molecular Interaction Platform for Membrane Protein Ta
-
批准号:7926683
-
项目类别:
-
资助金额:$20.0万
-
财政年份:2010
-
负责人:Scot Randy Weinberger
-
依托单位:
High Throughput, Label-Fee Molecular Interaction Platform for Membrane Protein Ta
-
批准号:8325037
-
项目类别:
-
资助金额:$102.77万
-
财政年份:2010
-
负责人:Scot Randy Weinberger
-
依托单位:
海外基金