CEGS: Center for Synthetic Regulatory Genomics - Renewal
CEGS: Center for Synthetic Regulatory Genomics - Renewal
批准号:
10652025
负责人:
Jef D BOEKE
金额:
$250.0万
依托单位国家:
美国
项目类别:
财政年份:
2018
资助国家:
美国
项目状态:
未结题
起止时间:
2018-06-12 至 2028-02-29
关键词:
AffectAnimal ModelAnimalsBase PairingBehaviorBindingBiochemicalBioethicsBiotechnologyBrainCell LineageCellsChromatinChromosomesClustered Regularly Interspaced Short Palindromic RepeatsCodeCollectionCommunitiesComplexCouplingCultured CellsDevelopmentDiseaseDisease modelElementsEmbryonic DevelopmentEngineeringEnhancersEnsureExposure toFailureFosteringGene Expression ProfileGene LibraryGenesGenetically Engineered MouseGenomeGenome engineeringGenomicsGenus VanillaHaplotypesHumanHuman GeneticsHuman GenomeImageImaging technologyInvestigationLengthLibrariesLightMammalian CellMapsMethodologyMinorityModelingModificationMolecular ConformationMusNuclearPhasePhenotypePlayPositioning AttributeProductionReagentRegulator GenesRegulatory ElementResearchResearch PersonnelResolutionResourcesRoleServicesSpottingsStudentsSystemTechnologyUntranslated RNAValidationVariantVisualizationWorkWritingYeastsZinc Fingerscombinatorialdark matterdesignfunctional genomicsgenome wide association studygenomic locusgenomic predictorshuman diseasehuman modelhumanized mouseimprovedinnovationmachine learning predictionmammalian genomemembermodel organismmouse modelnew technologyoutreachoutreach programpersonalized medicineportabilityprogramspromoterstem cellstooltraittranslational applicationsundergraduate studentvariant of interestvector
中文摘要
合成调控基因组学中心(Center for Synthetic Regulatory Genomics)
摘要
合成调控基因组学中心(SyRGe)的任务是开发和
应用革命性的技术,使戏剧性的,协调的变化,
以50-1000 kb的大DNA形式存在的广泛基因位点,
调控序列功能的研究和促进翻译的应用
到生物技术,个性化医疗和积极人性化的小鼠模型。
具体来说,我们将(i)加强我们的设计-建造-交付技术管道,
使其更加高效和精确,ii)实现“自下而上”的完全合成监管
景观,以及细胞和动物的多位点工程,最终在
研究大脑功能和行为的项目iii)在
大DNA水平,iv)开发新的工具来设计哺乳动物的巨大变化
以基因座不可知的方式研究基因组,以及v)开发成像技术,
我们正在运送的大DNA分子。
该中心将大大取代目前和预测的技术,
操纵和评估大DNA。其中一些工作将最终在
生产广泛的人源化动物模型,称为基因组重写,
定制的基因工程小鼠模型(GREAT-GEMM),我们的一个元素
值得进行生物伦理学辩论和讨论的项目。该中心还设有一个独特的
一个非常成功的外展计划,
背景在基因组组装中起着至关重要的作用,
让来自其他领域的研究人员和学生接触变革性的新技术,
促进其颁布整个更大的人类遗传学,模式生物,
基因组学社区最后,确保长期可持续获得
该中心开发的技术已向任何希望部署该技术的人提供,
落实到位。
英文摘要
Title: Center for Synthetic Regulatory Genomics
Abstract
The Center for Synthetic Regulatory Genomics (SyRGe) is tasked with development and
application of revolutionary technology for making dramatic, coordinated changes to
extensive gene loci in the form of Big DNAs of 50-1000 kb, which enable broad
investigation of the function of regulatory sequences and foster translational applications
to biotechnology, personalized medicine and aggressively humanized mouse models.
Specifically, we will (i) enhance our Design – Build – Deliver Technology pipeline ot
make it ever more efficient and precise, ii) enable “Bottom up” fully synthetic regulatory
landscapes, as well as multilocus engineering in both cells and animals, culminating in
projects to look at brain function and behavior iii) deploy combinatorial genomics at the
level of Big DNA, iv) Develop new tools to engineer megabase changes to mammalian
genomes in a locus-agnostic manner and v) Develop imaging technology to “light up” the
Big DNA molecules we are delivering.
The Center will dramatically supersede present and predicted technologies for
manipulation and assessment of Big DNAs. Some of this work will culminate in the
production of extensively humanized animal models called Genomically Rewritten and
Tailored Genetically Engineered Mouse Models (GREAT-GEMMs), an element of our
program worthy of bioethical debate and discussion. The Center also features a unique
and highly successful outreach program whereby undergraduates from diverse
backgrounds play a crucial role in genome assembly, as well as a Fellows program to
expose researchers and students from other fields to transformative new technology and
facilitate its promulgation throughout the larger human genetics, model organism and
genomics communities. Finally, mechanisms to ensure long-term sustainable access to
the technology developed in this Center to anyone who wishes to deploy it have been
put in place.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
The Assemblatron
-
批准号:10564169
-
项目类别:
-
资助金额:$102.92万
-
财政年份:2023
-
负责人:Jef D BOEKE
-
依托单位:
MutSensor System: A Set of Highly Sensitive Mutation Reporters to Dissect Genome Stability in Health and Disease
-
批准号:10737167
-
项目类别:
-
资助金额:$75.84万
-
财政年份:2023
-
负责人:Jef D BOEKE
-
依托单位:
eDyNAmiC - NYU
-
批准号:10845757
-
项目类别:
-
资助金额:$31.82万
-
财政年份:2022
-
负责人:Jef D BOEKE
-
依托单位:
eDyNAmiC - NYU
-
批准号:10625171
-
项目类别:
-
资助金额:$29.05万
-
财政年份:2022
-
负责人:Jef D BOEKE
-
依托单位:
Brca1-Mediated Suppression Of Retrotransposon Activity - Resubmission - 1
-
批准号:9979202
-
项目类别:
-
资助金额:$23.77万
-
财政年份:2020
-
负责人:Jef D BOEKE
-
依托单位:
Center for Synthetic Regulatory Genomics
-
批准号:10392966
-
项目类别:
-
资助金额:$197.25万
-
财政年份:2018
-
负责人:Jef D BOEKE
-
依托单位:
Center for Synthetic Regulatory Genomics
-
批准号:9900039
-
项目类别:
-
资助金额:$150.0万
-
财政年份:2018
-
负责人:Jef D BOEKE
-
依托单位:
Supplement for Center for Synthetic Regulatory Genomics: Building CACNA1C alleles associated with Neuropsychiatric Disorders
-
批准号:10405299
-
项目类别:
-
资助金额:$38.26万
-
财政年份:2018
-
负责人:Jef D BOEKE
-
依托单位:
Core B - Retrotransposon Genomics, Technology and Analysis Core
-
批准号:10581511
-
项目类别:
-
资助金额:$49.74万
-
财政年份:2016
-
负责人:Jef D BOEKE
-
依托单位:
Core B - Retrotransposon Genomics, Technology and Analysis Core
-
批准号:10333659
-
项目类别:
-
资助金额:$50.68万
-
财政年份:2016
-
负责人:Jef D BOEKE
-
依托单位:
Center for Systems Biology of Retrotransposition
-
批准号:8730690
-
项目类别:
-
资助金额:$185.58万
-
财政年份:2013
-
负责人:Jef D BOEKE
-
依托单位:
Center for Systems Biology of Retrotransposition
-
批准号:8850043
-
项目类别:
-
资助金额:$202.84万
-
财政年份:2013
-
负责人:Jef D BOEKE
-
依托单位:
Center for Systems Biology of Retrotransposition
-
批准号:8574156
-
项目类别:
-
资助金额:$12.78万
-
财政年份:2013
-
负责人:Jef D BOEKE
-
依托单位:
Monospecific monoclonal antibodies against human transcription factors
-
批准号:8222946
-
项目类别:
-
资助金额:$314.16万
-
财政年份:2011
-
负责人:Jef D BOEKE
-
依托单位:
NETWORKS, PATHWAYS AND DYNAMICS OF LYSINE MODIFICATION
-
批准号:8359910
-
项目类别:
-
资助金额:$346.6万
-
财政年份:2011
-
负责人:Jef D BOEKE
-
依托单位:
Monospecific monoclonal antibodies against human transcription factors
-
批准号:8338455
-
项目类别:
-
资助金额:$312.14万
-
财政年份:2011
-
负责人:Jef D BOEKE
-
依托单位:
Retrotransposon instability in glioblastoma multiforme
-
批准号:8699698
-
项目类别:
-
资助金额:$27.29万
-
财政年份:2011
-
负责人:Jef D BOEKE
-
依托单位:
Retrotransposon instability in glioblastoma multiforme
-
批准号:8831175
-
项目类别:
-
资助金额:$9.63万
-
财政年份:2011
-
负责人:Jef D BOEKE
-
依托单位:
Retrotransposon instability in glioblastoma multiforme
-
批准号:8178867
-
项目类别:
-
资助金额:$26.89万
-
财政年份:2011
-
负责人:Jef D BOEKE
-
依托单位:
Retrotransposon instability in glioblastoma multiforme
-
批准号:8510600
-
项目类别:
-
资助金额:$16.08万
-
财政年份:2011
-
负责人:Jef D BOEKE
-
依托单位:
海外基金