Mechanism of Cellulose Synthesis and Transport Across Biological Membranes
Mechanism of Cellulose Synthesis and Transport Across Biological Membranes
批准号:
10061615
负责人:
Jochen Zimmer
金额:
$54.73万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2012
资助国家:
美国
项目状态:
已结题
起止时间:
2012-05-05 至 2022-02-28
关键词:
3-DimensionalAddressAnabolismArchitectureBacteriaBindingBiochemicalBiologicalBiological AssayBiological ModelsBiophysicsBiopolymersC-terminalCell membraneCellsCelluloseChemicalsChromosomal translocationComplexCouplesCrystallizationDataDepositionElectron MicroscopyEnzymesFiberGlucansGlucoseGlycosidesGreen AlgaeHealthHospitalsHumanHydrolaseIn VitroIndividualInfectionKineticsLengthLipidsMeasurementMembraneMicrobial BiofilmsModelingMolecular ConformationNucleic AcidsOligosaccharidesPlanet EarthPolymersPolysaccharidesPolystyrenesProcessPropertyReactionRegulationResearchResolutionRiskRoentgen RaysSideSlideStructureSurfaceSystemTestingTransmembrane TransportUrochordataVascular PlantVesicleWorkX-Ray Crystallographyantimicrobialaptamerbacterial communitybiophysical techniquescell envelopecellulose synthaseexperimental studygenetic analysisgenetic linkage analysisin vivoinsightmicrobial communitynanodisknovel therapeuticsoptical trapsperiplasmpreventproteoliposomesreconstitutionsingle moleculesmall molecule
中文摘要
纤维素是地球上最丰富的生物聚合物。它是一种主要由葡萄糖和分子组成的线性聚合物。
不仅由维管束植物组成,还包括绿色藻类、细菌,甚至是被囊动物。细菌和纤维素是最重要的。
经常在生物膜中发现细菌,这些生物膜是固着的,细菌群落被包裹在一个完整的三维生物矩阵中。
多糖、蛋白质、纤维、蛋白质和核酸。细菌和生物膜对抗生素的敏感性较低。
约80%的医院感染是由治疗方法引起的,因此给患者带来了巨大的医疗风险。
人类健康。要开发一种新的治疗方法来治疗或预防细菌生物被膜和感染,需要一份详细的报告。
从机理上理解生物膜的组成成分,特别是多糖,它们是如何被合成的。
存放在牢房外。这一拟议的全球研究机构寻求提供更多信息。
细菌和纤维素的生物合成是研究细菌和纤维素的作用机制和调控机制的理想模型和系统。
多糖类的分泌。革兰氏阴性菌可以产生细菌,并通过一种多亚单位的复合体分泌纤维素。
由BCSA的内膜、BCSB的亚基、周质的BcsZ水解酶以及BCSB的内膜组成。
BCSC的外膜和亚单位。在我们之前的工作中,我们提供了详细的机械性的洞察力,了解了BCSC的内部是如何形成的。
膜整合的BCSA-B复合体延长了纤维素链的长度,并使其在整个过程中转移到主要的聚合物链上。
质膜。虽然目前的数据可以解释纤维素膜是如何延伸的,但我们目前还没有关于它的更多信息。
纤维素的生物合成是如何启动的。这个问题将通过生物化学的方法来解决,目的是通过重组来实现这一目标。
在体外,从无细胞生物中引发的反应表达了一种没有启动的纤维素A合成酶。
BCSA不断地拉长纤维素膜,并将聚合物推入由其表面形成的跨膜通道。
自己的膜-横跨整个地区。他们的结构快照显示了不同的纤维素酶和合成酶在纤维素合成过程中的状态。
合成酶和细胞膜的移位可以为研究这一过程中的构象变化提供更深入的见解。
目前还没有对纤维素转运率和加工效率要求的精准分析报告。
失踪。我们将在一个单一的分子水平上解决这些问题,使用一种光学上被困住的原子和催化剂。
活跃的BCSA-üB在目标为1b的情况下提供复杂的服务。
穿过革兰氏底片中的内膜和外膜,纤维素膜必须穿过细胞质,穿过外膜。
在到达细菌生物膜基质之前,这段细菌的移位路径很可能是由细菌直接作用形成的。
外质膜组分和外膜组分的相互作用与内膜上的BCSA-B复合体相互作用。
在第二个目标中,我们将寻求方法来重建从纳米磁盘和蛋白质脂质体中提取的纤维素膜和蛋白质脂质体的外膜运输系统--
重组后的组件用于详细的动力学、生物化学、生物化学和生物相互作用研究。这些信息将提供给用户。
支持我们为进一步确定一种内部结构和外部结构--跨越纤维素酶和合成酶的外部膜--所做的努力。
正如我们在《目标3》中所概述的那样,我们将继续使用X射线、结晶学和/或电子显微镜来确定是否存在。
单个外质膜组分和外膜组分的结构特征及其与BCSA-B的相互作用。
英文摘要
Cellulose is the most abundant biopolymer on earth. It is a linear polymer of glucose molecules primarily
formed by vascular plants but also by green algae, bacteria, and even tunicates. Bacterial cellulose is
frequently found in biofilms, which are sessile bacterial communities encased in a 3-dimensional matrix of
polysaccharides, proteinaceous fibers, and nucleic acids. Biofilm bacteria are less susceptible to anti-microbial
treatments and are responsible for about 80% of hospital-derived infections, thereby posing a significant risk to
human health. Developing novel therapeutics to treat or prevent biofilm infections requires a detailed
mechanistic understanding of how the biofilm constituents, in particular polysaccharides, are synthesized and
deposited outside the cell. The proposed research seeks to provide this information.
Bacterial cellulose biosynthesis is an ideal model system to study the mechanism and regulation of exo-
polysaccharide secretion. Gram-negatives produce and secrete cellulose via a multi-subunit complex
consisting of the inner membrane BcsA and BcsB subunits, the periplasmic BcsZ hydrolase, as well as the
outer membrane subunit BcsC. Our previous work provided detailed mechanistic insights into how the inner
membrane-integrated BcsA-B complex elongates the cellulose chain and translocates the polymer across the
plasma membrane. While current data explain how cellulose is extended, we currently have no information on
how cellulose biosynthesis initiates. This question will be addressed biochemically in Aim 1a by reconstituting
the initiation reaction in vitro from cell-free expressed 'uninitiated' cellulose synthase.
BcsA processively elongates cellulose and pushes the polymer into a transmembrane channel formed by its
own membrane-spanning region. Structural snapshots of different cellulose synthase states during cellulose
synthesis and membrane translocation provide insights into conformational changes during this process. Yet a
precise analysis of energetic requirements for and processivity rates of cellulose translocation is currently
missing. We will address these questions on a single molecule level using an optically trapped and catalytically
active BcsA-B complex in Aim 1b.
Past the inner membrane and in Gram-negatives, cellulose must cross the periplasm and the outer membrane
before reaching the biofilm matrix. This section of the translocation path is most likely formed by a direct
interaction of periplasmic and outer membrane components with the BcsA-B complex at the inner membrane.
In Aim 2 we seek to reconstitute outer membrane transport of cellulose from nanodisc and proteoliposome-
reconstituted components for detailed kinetic, biochemical, and interaction studies. This information will
support our efforts to determine the structure of an inner and outer membrane-spanning cellulose synthase
complex as outlined in Aim 3. We will use X-ray crystallography and/or electron microscopy to determine the
structure of individual periplasmic and outer membrane components as well as their complexes with BcsA-B.
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DOI:
10.1038/nsmb.2803
发表时间:
2014-05
期刊:
Nature structural & molecular biology
影响因子:
16.8
作者:
[Morgan JL, McNamara JT, Zimmer J]
通讯作者:
Zimmer J
DOI:
10.1146/annurev-biochem-060614-033930
发表时间:
2015
期刊:
Annual review of biochemistry
影响因子:
16.6
作者:
[McNamara JT, Morgan JL, Zimmer J]
通讯作者:
Zimmer J
DOI:
10.1038/nature11744
发表时间:
2013-01-10
期刊:
Nature
影响因子:
64.8
作者:
[]
通讯作者:
DOI:
10.1016/bs.mie.2014.12.024
发表时间:
2015
期刊:
Methods in enzymology
影响因子:
--
作者:
[Sandra Poulos;J. Morgan;J. Zimmer;S. Faham]
通讯作者:
Sandra Poulos;J. Morgan;J. Zimmer;S. Faham
DOI:
10.1038/nature16966
发表时间:
2016-03-17
期刊:
Nature
影响因子:
64.8
作者:
[Morgan JL, McNamara JT, Fischer M, Rich J, Chen HM, Withers SG, Zimmer J]
通讯作者:
Zimmer J
共 7 条
Synthesis, secretion and assembly of extracellular complex carbohydrates in Gram-negative bacteria
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批准号:10543793
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项目类别:
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资助金额:$54.07万
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财政年份:2022
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依托单位:
Synthesis, secretion and assembly of extracellular complex carbohydrates in Gram-negative bacteria
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批准号:10330628
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资助金额:$42.19万
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ABC transporter-mediated secretion of capsular polysaccharides
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Molecular Basis for Group A Streptococcus Encapsulation
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批准号:10176394
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项目类别:
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资助金额:$19.71万
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财政年份:2020
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依托单位:
Molecular Basis for Group A Streptococcus Encapsulation
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批准号:10057347
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资助金额:$22.83万
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财政年份:2020
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依托单位:
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批准号:10238961
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项目类别:
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资助金额:$28.82万
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财政年份:2018
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依托单位:
Molecular mechanisms of microbial complex carbohydrate secretion
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批准号:9769067
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项目类别:
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资助金额:$28.28万
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财政年份:2018
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负责人:Jochen Zimmer
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依托单位:
Molecular Biology of Hyaluronan Biosynthesis
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批准号:8816855
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项目类别:
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资助金额:$27.55万
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财政年份:2015
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负责人:Jochen Zimmer
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依托单位:
Mechanism of cellulose synthesis and transport across biological membranes
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批准号:9016558
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项目类别:
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资助金额:$29.79万
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财政年份:2012
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负责人:Jochen Zimmer
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依托单位:
Mechanism of cellulose synthesis and transport across biological membranes
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批准号:8466338
-
项目类别:
-
资助金额:$27.91万
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财政年份:2012
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负责人:Jochen Zimmer
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依托单位:
Mechanism of cellulose synthesis and transport across biological membranes
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批准号:8272816
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项目类别:
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资助金额:$27.7万
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财政年份:2012
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负责人:Jochen Zimmer
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依托单位:
海外基金