Curation of Model Organism Phenotype and Disease Model Data to Augment Gabriella Miller Kid's First Data Sets for Enhanced Discovery and Therapeutic Development

项目总结 出生时有结构性缺陷的儿童患儿科癌症的风险增加，这意味着 这两种疾病之间有共同的遗传途径。然而，研究这些疾病可能具有挑战性。 由于可获得的儿科数据数量有限。模式生物越来越多地被用来理解 人类疾病的遗传基础，为功能和表型验证以及 发现潜在的生物标志物和治疗靶点。加布里埃拉·米勒儿童第一数据资源中心 目前存储着人类儿科癌症和出生缺陷数据集，但无法获得有价值的模型 生物体数据。这项提案的总体目标是提供有重点的鼠标和 斑马鱼疾病儿童癌症模型和结构性出生缺陷模型的建立 生物体数据，并提供与癌症和结构性出生缺陷有关的所有模型生物体数据 在基因组资源联盟。具体目标1是提供有针对性的动物模型文献管理 与儿童癌症和结构性出生缺陷有关的疾病。具体地说，a)有重点的文学策划 与儿童癌症和结构性出生缺陷有关的老鼠和斑马鱼基因和模型的研究将是 进行；以及b)老鼠和斑马鱼疾病和表型本体论和术语关系 扩展以支持管理和跨物种分析。具体目标2是提供定制的搜索 与儿童癌症和结构性疾病相关的联盟模型生物基因和疾病模型数据的门户 先天缺陷。具体地说，a)将创建联盟数据的基因和疾病页面门户，访问 有关儿童癌症和结构性出生缺陷的基因、疾病模型和文献的信息； 以及b)将提供有关疾病模型的可用性以及使用这些模型的研究人员的信息。 使用与儿童癌症和结构性出生缺陷相关的模型生物体数据来填补知识空白 将导致对这些条件的更深入的了解，有助于发现生物标志物和潜在的 治疗靶点以及提供有效的功能和表型验证工具，使 为这些儿科疾病开发基于精确的干预措施。

PROJECT SUMMARY Children born with structural birth defects have an increased risk of developing pediatric cancer, implicating shared genetic pathways between these two disorders. However, studying these diseases can be challenging due to the limited amount of pediatric data available. Model organisms are increasingly used to understand the genetic basis of human disease, providing effective tools for functional and phenotypic validation as well as discovery of potential biomarkers and therapeutic targets. The Gabriella Miller Kids First Data Resource Center currently houses human pediatric cancer and birth defect data sets but lacks access to valuable model organism data. The overall objective of this proposal is to deliver focused literature curation of mouse and zebrafish disease models of childhood cancer and structural birth defects to increase the availability of model organism data, and to provide access to all model organism data relevant to cancer and structural birth defects in the Alliance of Genome Resources. Specific Aim 1 is to provide focused literature curation of animal models of diseases relevant to childhood cancer and structural birth defects. Specifically, a) focused literature curation of mouse and zebrafish genes and models of interest to childhood cancer and structural birth defects will be conducted; and b) mouse and zebrafish disease and phenotype ontologies and term relationships will be expanded to support curation and cross-species analysis. Specific Aim 2 is to provide a customized search portal for Alliance model organism gene and disease model data related to childhood cancer and structural birth defects. Specifically, a) gene and disease page portals to Alliance data will be created, accessing information on genes, disease models and literature relevant to childhood cancer and structural birth defects; and b) information on availability of disease models and the researchers using these models will be provided. Using model organism data relevant to childhood cancer and structural birth defects to fill in gaps of knowledge will lead to a deeper understanding of these conditions, aiding in the discovery of biomarkers and potential therapeutic targets as well as providing effective tools for functional and phenotypic validation enabling the development of precision-based interventions for these pediatric diseases.