Pedigree reconstruction , mating systems, reproductive success and quantitative genetics of natural populations

近年来，人们对利用分子信息来推断自然种群或缺乏系谱信息的栽培种群中个体之间的系谱(系谱)关系的可能性产生了相当大的兴趣。当父母的DNA图谱可用时，这就很容易了。当父母数据不可用时，显式谱系重建的问题要复杂得多，必须使用计算机密集的方法。拟议计划的广泛目标是进一步改进和扩大过去几年为谱系重建开发的计算机程序，以便研究界能够获得强大和用户友好的工具，以研究亲缘关系的分布并估计自然和半自然种群中的关键遗传参数，目前这一点是极其困难的。这项研究还将在两个关键的自然系统模型中使用这些方法，两个三文鱼种群正在经历严重下降并濒临灭绝，以及一种正在加拿大大西洋海岸蔓延的水生入侵物种。这项工作将在研究两个濒危鲑鱼种群的交配系统、繁殖成功和亲缘关系的时空分布方面产生新的发现。这将揭示小种群进化和保护的几个关键方面，例如近亲繁殖在灭绝中可能发挥的作用，以及圈养繁殖计划的遗传后果。在生物多样性关注的另一端，该计划将在几个空间尺度上导致与水生入侵物种爆炸性增长相关的遗传维度的新发现，并可能有助于预测加拿大大西洋海岸被毛类“热点”种群的扩散和增长。

In recent years, there has been considerable interest in the possibility of using molecular information to infer genealogical (pedigree) relationships among individuals in natural populations or in cultivated populations where this pedigree information is lacking. When parental DNA profiles are available, this is easy. When parental data are not available, the problem of explicit pedigree reconstruction is considerably more complex and computer intensive approaches have to be used. The broad objectives of the proposed program are to further improve and broaden the computer programs that have been developed over the last few years for pedigree reconstruction, so that the research community can have access to powerful and user-friendly tools to study the distribution of relatedness and estimate key genetic parameters in natural and semi natural populations where this has been extremely difficult so far. This research will also use these approaches in two key model natural systems, two salmon populations experiencing severe decline and on the verge of disappearance and an aquatic invasive species that is spreading on Canada's Atlantic coast. This work will generate new findings in the study of mating systems, reproductive success, and spatio-temporal distribution of relatedness in the two endangered salmon populations. This will cast light on several crucial aspects of the evolution and conservation of small populations, such as the possible role of inbreeding in extinction and the genetic consequences of captive breeding programs. At the other end of the spectrum of biodiversity concerns, this program will result in new findings on the genetic dimension associated at several spatial scales with the explosive growth of an aquatic invasive species, and could help predict the dispersal and growth of tunicates "hot spots" populations on Canada's Atlantic coast.