Genomes of the Hymenoptera.

Genomes of the Hymenoptera.
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DOI:
10.1016/j.cois.2017.11.008
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发表时间:
2018-03
影响因子:
5.3
通讯作者:
Worley KC
Worley KC
中科院分区:
农林科学2区
文献类型:
--
作者:
Branstetter MG;Childers AK;Cox-Foster D;Hopper KR;Kapheim KM;Toth AL;Worley KC

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虽然Hyplitera是第二大测序的节肢动物目,有52个已存档的基因组(71个与蚂蚁,在其他地方审查),这些基因组并没有捕捉到这个非常多样化的目的的广度(图1,表1)。这些测序的基因组仅代表97个现存家族中的15个。虽然在另外11个家族中至少有55个其他基因组正在进行中(见表2),但刺黄蜂占可用基因组的35个(67%)和42个(76%)。一个更全面的目录hyperteran基因组是必要的研究进化过程中的广泛多样性的生态,行为和生理特征在这个群体。需要额外的测序来生成估计的100万个Hypherteran物种中的0.05%的组装体,以及分散在该命令中的> 150,000个命名物种中至少0.1%的首要水平组装体。考虑到膜翅目的单倍二倍体性别决定,单倍体雄性测序将有助于最大限度地减少基因组组装问题,以实现更高质量的基因组组装。
Although Hymenoptera is the second-most sequenced arthropod order, with 52 publically archived genomes (71 with ants, reviewed elsewhere), these genomes do not capture the breadth of this very diverse order (Figure 1, Table 1). These sequenced genomes represent only 15 of the 97 extant families. Although at least 55 other genomes are in progress in an additional 11 families (see Table 2), stinging wasps represent 35 (67%) of the available and 42 (76%) of the in progress genomes. A more comprehensive catalogue of hymenopteran genomes is needed for research into the evolutionary processes underlying the expansive diversity in terms of ecology, behavior, and physiological traits within this group. Additional sequencing is needed to generate an assembly for even 0.05% of the estimated 1 million Hymenopteran species, with premier level assemblies for at least 0.1% of the >150,000 named species dispersed across the order. Given the haplodiploid sex determination in Hymenoptera, haploid male sequencing will help minimize genome assembly issues to enable higher quality genome assemblies.
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