Navigating protected genomics data with UCSC Genome Browser in a Box.

Navigating protected genomics data with UCSC Genome Browser in a Box.
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DOI:
10.1093/bioinformatics/btu712
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发表时间:
2015-03-01
期刊:
Bioinformatics (Oxford, England)
影响因子:
--
通讯作者:
Kent WJ
Kent WJ
中科院分区:
其他
文献类型:
--
作者:
Haeussler M;Raney BJ;Hinrichs AS;Clawson H;Zweig AS;Karolchik D;Casper J;Speir ML;Haussler D;Kent WJ

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总结:Genome Browser in a Box(GBiB)是流行的加州大学圣克鲁斯分校(UCSC)基因组浏览器的小型虚拟机版本,可以在研究人员自己的计算机上运行。安装GBiB后,使用标准Web浏览器访问虚拟服务器并从本地硬盘添加个人数据文件。注释数据通过互联网从UCSC按需加载,或者可以下载到本地计算机以更快地访问。可用性和实施:软件下载和安装说明可在https://genome-store.ucsc.edu/上免费获得,用于非商业用途。GBiB需要安装适用于所有主要操作系统的开源软件VirtualBox和UCSC基因组浏览器,该浏览器是开源的,可免费用于非商业用途。商业使用GBiB和基因组浏览器需要许可证(http://genome.ucsc.edu/license/)。联系方式:genome@soe.ucsc.edu
Summary: Genome Browser in a Box (GBiB) is a small virtual machine version of the popular University of California Santa Cruz (UCSC) Genome Browser that can be run on a researcher's own computer. Once GBiB is installed, a standard web browser is used to access the virtual server and add personal data files from the local hard disk. Annotation data are loaded on demand through the Internet from UCSC or can be downloaded to the local computer for faster access. Availability and implementation: Software downloads and installation instructions are freely available for non-commercial use at https://genome-store.ucsc.edu/. GBiB requires the installation of open-source software VirtualBox, available for all major operating systems, and the UCSC Genome Browser, which is open source and free for non-commercial use. Commercial use of GBiB and the Genome Browser requires a license (http://genome.ucsc.edu/license/). Contact: genome@soe.ucsc.edu
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