Proposal for a revised taxonomy of the family Filoviridae: classification, names of taxa and viruses, and virus abbreviations.

Proposal for a revised taxonomy of the family Filoviridae: classification, names of taxa and viruses, and virus abbreviations.
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DOI:
10.1007/s00705-010-0814-x
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发表时间:
2010-12
影响因子:
2.7
通讯作者:
Jahrling, Peter B.
Jahrling, Peter B.
中科院分区:
医学4区
文献类型:
--
作者:
Kuhn, Jens H.;Becker, Stephan;Ebihara, Hideki;Geisbert, Thomas W.;Johnson, Karl M.;Kawaoka, Yoshihiro;Lipkin, W. Ian;Negredo, Ana I.;Netesov, Sergey V.;Nichol, Stuart T.;Palacios, Gustavo;Peters, Clarence J.;Tenorio, Antonio;Volchkov, Viktor E.;Jahrling, Peter B.

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丝状病毒科(马尔堡病毒和埃博拉病毒)的分类学自发现其成员以来发生了多次变化,导致了大量的物种和病毒名称和缩写。目前的分类方法只被大多数实验室病毒学家部分接受。造成混淆可能有以下几个原因:物种名称由几个单词组成或(应该)包含变音符号,目前物种和病毒名称的正字法相同,以及在缺乏正确使用白话名称的指导下,几个病毒缩写的发音相似。为了纠正这一问题,我们建议(1)保留目前的雷斯顿埃博拉病毒、苏丹埃博拉病毒和扎伊尔埃博拉病毒的物种名称,但将科特迪瓦埃博拉病毒[原文如此]的名称改为Taï森林埃博拉病毒和维多利亚湖马尔堡病毒的名称改为马尔堡马尔堡病毒;(2)将马尔堡病毒和埃博拉病毒类型的病毒名称恢复为该领域几十年来使用的名称(马尔堡病毒代替维多利亚湖马尔堡病毒,埃博拉病毒代替扎伊尔埃博拉病毒);(3)为剩下的病毒引入让人想起实验室病毒学家使用的术语,但与物种名称不同的名称(雷斯顿病毒、苏丹病毒、Taï森林病毒);(4)为单个病毒引入不同的缩写(雷斯顿病毒为RESTV,苏丹病毒为SUDV, Taï森林病毒为TAFV),同时保留马尔堡病毒(MARV)的缩写,并重新引入几十年来用于埃博拉病毒(EBOV)的缩写。鉴于该领域的发展,我们建议(a)为一个成员病毒(本迪布焦病毒,BDBV)创建一个新的埃博拉病毒物种(本迪布焦埃博拉病毒);(b)为马尔堡马尔堡病毒(Ravn病毒,RAVV)这一物种指定第二种病毒,以便更好地反映现有的高分辨率系统发育;(c)用一个暂定种(Lloviu Cuevavirus)为最近发现的Lloviu病毒(LLOV)创建一个新的暂定属(Cuevavirus)。此外,我们解释了个体名称的词源来源、发音和正确用法,并详细说明了每个分类单元和病毒的划分标准。
The taxonomy of the family Filoviridae (marburgviruses and ebolaviruses) has changed several times since the discovery of its members, resulting in a plethora of species and virus names and abbreviations. The current taxonomy has only been partially accepted by most laboratory virologists. Confusion likely arose for several reasons: species names that consist of several words or which (should) contain diacritical marks, the current orthographic identity of species and virus names, and the similar pronunciation of several virus abbreviations in the absence of guidance for the correct use of vernacular names. To rectify this problem, we suggest (1) to retain the current species names Reston ebolavirus, Sudan ebolavirus, and Zaire ebolavirus, but to replace the name Cote d'Ivoire ebolavirus [sic] with Taï Forest ebolavirus and Lake Victoria marburgvirus with Marburg marburgvirus; (2) to revert the virus names of the type marburgviruses and ebolaviruses to those used for decades in the field (Marburg virus instead of Lake Victoria marburgvirus and Ebola virus instead of Zaire ebolavirus); (3) to introduce names for the remaining viruses reminiscent of jargon used by laboratory virologists but nevertheless different from species names (Reston virus, Sudan virus, Taï Forest virus), and (4) to introduce distinct abbreviations for the individual viruses (RESTV for Reston virus, SUDV for Sudan virus, and TAFV for Taï Forest virus), while retaining that for Marburg virus (MARV) and reintroducing that used over decades for Ebola virus (EBOV). Paying tribute to developments in the field, we propose (a) to create a new ebolavirus species (Bundibugyo ebolavirus) for one member virus (Bundibugyo virus, BDBV); (b) to assign a second virus to the species Marburg marburgvirus (Ravn virus, RAVV) for better reflection of now available high-resolution phylogeny; and (c) to create a new tentative genus (Cuevavirus) with one tentative species (Lloviu cuevavirus) for the recently discovered Lloviu virus (LLOV). Furthermore, we explain the etymological derivation of individual names, their pronunciation, and their correct use, and we elaborate on demarcation criteria for each taxon and virus.
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