A first-generation microsatellite linkage map of the ruff.
A first-generation microsatellite linkage map of the ruff.
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DOI：
10.1002/ece3.830
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发表时间：
2013-11
影响因子：
2.6
通讯作者：
Lank, David B.
中科院分区：
文献类型：
--
作者：
Farrell, Lindsay L.;Burke, Terry;Slate, Jon;Lank, David B.
利用58个微卫星位点对来自64个家系、14个繁殖年限的381个人工饲养个体进行了遗传分析，构建了皱皮山雀（Philomachus pugnax）基因组的连锁图谱。28个标记被分解为7个连锁群和5个单标记位点，与已知的鸡（原鸡）和斑胸草雀（Taeniopygia guttata）染色体同源。连锁群的长度范围为10.1至488.7 cM，覆盖的总图距为641.6 cM，相当于估计的30-35%的覆盖率的皱皮基因组，与平均间距为22.9 cM的基因座之间。通过比较映射，我们能够分配连锁群PPU 1，PPU 2，PPU 6，PPU 7，PPU 10，PPU 13，和PPUZ的染色体和确定几个染色体内重排之间的同源鸡，斑马雀，和皱皮微卫星位点。这是第一个连锁图谱中创建的皱，是一个重要的一步，为这个神秘的物种提供基因组资源。它将提供一个重要的框架，为映射的表型和行为的重要位点的皱领。
A linkage map of the ruff (Philomachus pugnax) genome was constructed based on segregation analysis of 58 microsatellite loci from 381 captive-bred individuals spanning fourteen breeding years and comprising 64 families. Twenty-eight of the markers were resolved into seven linkage groups and five single marker loci, homologous to known chicken (Gallus gallus) and zebra finch (Taeniopygia guttata) chromosomes. Linkage groups range from 10.1 to 488.7 cM in length and covered a total map distance of 641.6 cM, corresponding to an estimated 30–35% coverage of the ruff genome, with a mean spacing of 22.9 cM between loci. Through comparative mapping, we are able to assign linkage groups Ppu1, Ppu2, Ppu6, Ppu7, Ppu10, Ppu13, and PpuZ to chromosomes and identify several intrachromosomal rearrangements between the homologs of chicken, zebra finch, and ruff microsatellite loci. This is the first linkage map created in the ruff and is a major step toward providing genomic resources for this enigmatic species. It will provide an essential framework for mapping of phenotypically and behaviorally important loci in the ruff.
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影响因子：
4.4
作者：
Küpper C;Burke T;Székely T;Dawson DA
通讯作者：
Dawson DA
DOI：
10.1111/j.1471-8286.2007.01709.x
发表时间：
2007-09-01
期刊：
MOLECULAR ECOLOGY NOTES
影响因子：
--
作者：
John, J. St.;Kysela, R. F.;Oyler-Mccance, S. J.
通讯作者：
Oyler-Mccance, S. J.
影响因子：
1.7
作者：
Griffin, D. K.;Robertson, L. B. W.;Skinner, B. M.
通讯作者：
Skinner, B. M.
日本鹌鹑微卫星连杆地图上的熊猫羽毛颜色基因座的映射。
影响因子：
2.9
作者：
Miwa M;Inoue-Murayama M;Kobayashi N;Kayang BB;Mizutani M;Takahashi H;Ito S
通讯作者：
Ito S
影响因子：
4.9
作者：
Richardson, DS;Jury, FL;Burke, T
通讯作者：
Burke, T