IMG/M: the integrated metagenome data management and comparative analysis system.

IMG/M: the integrated metagenome data management and comparative analysis system.
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DOI:
10.1093/nar/gkr975
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发表时间:
2012-01
影响因子:
14.9
通讯作者:
Kyrpides NC
Kyrpides NC
中科院分区:
生物学2区
文献类型:
--
作者:
Markowitz VM;Chen IM;Chu K;Szeto E;Palaniappan K;Grechkin Y;Ratner A;Jacob B;Pati A;Huntemann M;Liolios K;Pagani I;Anderson I;Mavromatis K;Ivanova NN;Kyrpides NC

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综合的微生物基因组和宏基因组(IMG/M)系统为在全面的综合背景下对微生物群落骨料基因组(元基因组)进行比较分析提供了支持。 IMG/M将元基因组数据集与来自IMG系统的分离株微生物基因组集成。自2007年首次发布以来,IMG/M的数据内容和分析功能已通过常规更新扩展。IMG/M可在http://img.jgi.doe.gov/m上找到。同伴IMG/M系统为未发表的元基因组数据集的注释和专家审查提供了支持(img/m er:http://img.jgi.doe.gov/mer)。
The integrated microbial genomes and metagenomes (IMG/M) system provides support for comparative analysis of microbial community aggregate genomes (metagenomes) in a comprehensive integrated context. IMG/M integrates metagenome data sets with isolate microbial genomes from the IMG system. IMG/M's data content and analytical capabilities have been extended through regular updates since its first release in 2007. IMG/M is available at http://img.jgi.doe.gov/m. A companion IMG/M systems provide support for annotation and expert review of unpublished metagenomic data sets (IMG/M ER: http://img.jgi.doe.gov/mer).
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