Vibrational, Orientational, and Conformational Dynamics of Molecules in Solution

溶液中分子的振动、取向和构象动力学

基本信息

  • 批准号:
    0079268
  • 负责人:
  • 金额:
    --
  • 依托单位:
  • 依托单位国家:
    美国
  • 项目类别:
    Standard Grant
  • 财政年份:
    2000
  • 资助国家:
    美国
  • 起止时间:
    2000-08-01 至 2003-07-31
  • 项目状态:
    已结题

项目摘要

Professor Andrei Tokmakoff of MIT is supported by the Experimental Physical Chemistry program to perform experimental studies on the ultrafast dynamics of proteins. This fundamental study will probe the basis for the forces that govern protein folding. The PI will use two-dimensional ultrafast infrared spectroscopy and Raman spectroscopy to measure the dynamics of the amide bands of peptides and proteins as functions of temperature, pH and solvent. The method will probe vibrational couplings, energy dissipation, solvent-protein interactions and structural heterogeneity in a unique way. The process by which proteins attain their intended 3 dimensional structures from a very large number of possible structures is not well understood, and this is a major unsolved problem in biochemistry. The proposed work is especially timely because of recent progress in computational methods for studying protein folding. New experiments in this area are critically needed and the PI proposes novel laser based approaches in analogy to methods utilized in Nuclear Magnetic Resonance spectroscopy.
麻省理工学院的Andrei Tokmakoff教授得到了实验物理化学计划的支持,对蛋白质的超快动力学进行实验研究。 这项基础研究将探索支配蛋白质折叠的力的基础。 PI将使用二维超快红外光谱和拉曼光谱来测量肽和蛋白质酰胺谱带随温度、pH值和溶剂变化的动力学。 该方法将探测振动耦合,能量耗散,溶剂-蛋白质相互作用和结构异质性以独特的方式。蛋白质从大量可能的结构中获得其预期三维结构的过程尚未得到很好的理解,这是生物化学中未解决的主要问题。 由于最近在研究蛋白质折叠的计算方法方面取得了进展,因此建议的工作特别及时。 在这一领域的新实验是迫切需要的,PI提出了新的激光为基础的方法,类似于核磁共振光谱法中使用的方法。

项目成果

期刊论文数量(0)
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会议论文数量(0)
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Andrei Tokmakoff其他文献

Water-mediated ion transport in an anion exchange membrane
阴离子交换膜中的水介导离子传输
  • DOI:
    10.1038/s41467-024-55621-z
  • 发表时间:
    2025-01-28
  • 期刊:
  • 影响因子:
    15.700
  • 作者:
    Zhongyang Wang;Ge Sun;Nicholas H. C. Lewis;Mrinmay Mandal;Abhishek Sharma;Mincheol Kim;Joan M. Montes de Oca;Kai Wang;Aaron Taggart;Alex B. Martinson;Paul A. Kohl;Andrei Tokmakoff;Shrayesh N. Patel;Paul F. Nealey;Juan J. de Pablo
  • 通讯作者:
    Juan J. de Pablo
Direct observation of protein-peptide folding and binding in the formation of ribonuclease S
  • DOI:
    10.1016/j.bpj.2023.11.2800
  • 发表时间:
    2024-02-08
  • 期刊:
  • 影响因子:
  • 作者:
    Yumin Lee;Brennan Ashwood;Yiheng Wu;Balamurugan Dhayalan;Isabelle Gagnon;Tobin R. Sosnick;Andrei Tokmakoff
  • 通讯作者:
    Andrei Tokmakoff
Refining Peptide Conformational Landscape by Amide I Infrared Spectroscopy and MD Simulations
  • DOI:
    10.1016/j.bpj.2017.11.2137
  • 发表时间:
    2018-02-02
  • 期刊:
  • 影响因子:
  • 作者:
    Chi-Jui Feng;Balamurugan Dhayalan;Xinxing Zhang;Andrei Tokmakoff
  • 通讯作者:
    Andrei Tokmakoff
Characterizing protein conformational ensembles and dynamics with 2D IR spectroscopy
  • DOI:
    10.1016/j.bpj.2022.11.1827
  • 发表时间:
    2023-02-10
  • 期刊:
  • 影响因子:
  • 作者:
    Andrei Tokmakoff
  • 通讯作者:
    Andrei Tokmakoff
Insight into Coupled Binding and Folding in Insulin Dimer Association from T-Jump Induced Dissociation Experiments
  • DOI:
    10.1016/j.bpj.2017.11.1171
  • 发表时间:
    2018-02-02
  • 期刊:
  • 影响因子:
  • 作者:
    Xinxing Zhang;Andrei Tokmakoff
  • 通讯作者:
    Andrei Tokmakoff

Andrei Tokmakoff的其他文献

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{{ truncateString('Andrei Tokmakoff', 18)}}的其他基金

Fluorescence-Encoded Infrared Spectroscopy for Single-Molecule Chemical Dynamics
用于单分子化学动力学的荧光编码红外光谱
  • 批准号:
    2155027
  • 财政年份:
    2022
  • 资助金额:
    --
  • 项目类别:
    Standard Grant
Fluorescence-Encoded Infrared Spectroscopy for Single-Molecule Chemical Dynamics
用于单分子化学动力学的荧光编码红外光谱
  • 批准号:
    1856684
  • 财政年份:
    2019
  • 资助金额:
    --
  • 项目类别:
    Continuing Grant
Two-Dimensional Infrared Spectroscopy of the Conformational Dynamics of Biomolecules
生物分子构象动力学的二维红外光谱
  • 批准号:
    1561888
  • 财政年份:
    2016
  • 资助金额:
    --
  • 项目类别:
    Continuing Grant
Two-Dimensional Infrared Spectroscopy of the Conformational Dynamics of Biomolecules
生物分子构象动力学的二维红外光谱
  • 批准号:
    1414486
  • 财政年份:
    2013
  • 资助金额:
    --
  • 项目类别:
    Continuing Grant
Two-Dimensional Infrared Spectroscopy of the Conformational Dynamics of Biomolecules
生物分子构象动力学的二维红外光谱
  • 批准号:
    1212557
  • 财政年份:
    2012
  • 资助金额:
    --
  • 项目类别:
    Continuing Grant
Two-dimensional infrared spectroscopy of protein conformational dynamics
蛋白质构象动力学的二维红外光谱
  • 批准号:
    0911107
  • 财政年份:
    2009
  • 资助金额:
    --
  • 项目类别:
    Continuing Grant
Vibrational, Orientational, and Conformational Dynamics of Molecules in Solution
溶液中分子的振动、取向和构象动力学
  • 批准号:
    0616575
  • 财政年份:
    2006
  • 资助金额:
    --
  • 项目类别:
    Continuing Grant
Vibrational, Orientational, and Conformational Dynamics of Molecules in Solution
溶液中分子的振动、取向和构象动力学
  • 批准号:
    0316736
  • 财政年份:
    2003
  • 资助金额:
    --
  • 项目类别:
    Continuing Grant
Vibrational and Structural Dynamics in Complex Liquids
复杂液体中的振动和结构动力学
  • 批准号:
    9900342
  • 财政年份:
    1998
  • 资助金额:
    --
  • 项目类别:
    Standard Grant
Postdoctoral Research Fellowships in Chemistry
化学博士后研究奖学金
  • 批准号:
    9504804
  • 财政年份:
    1995
  • 资助金额:
    --
  • 项目类别:
    Fellowship Award

相似海外基金

Liquid Crystalline Orientational Excitations in Biological Membranes
生物膜中的液晶取向激发
  • 批准号:
    RGPIN-2022-03085
  • 财政年份:
    2022
  • 资助金额:
    --
  • 项目类别:
    Discovery Grants Program - Individual
CDS&E: Orientational High and Low Field Ion Mobility Calculator with Gas Accommodation
CDS
  • 批准号:
    1904879
  • 财政年份:
    2019
  • 资助金额:
    --
  • 项目类别:
    Continuing Grant
Rational Design of High Dielectric Constant and Low Loss Dipolar Glass Polymers with Enhanced Orientational Polarization
增强取向偏振的高介电常数、低损耗偶极玻璃聚合物的合理设计
  • 批准号:
    1708990
  • 财政年份:
    2017
  • 资助金额:
    --
  • 项目类别:
    Standard Grant
Minute area XAFS development for orientational evaluations of structure controlled functional organic polymer materials
用于结构控制功能有机聚合物材料取向评估的微小面积 XAFS 开发
  • 批准号:
    16K05020
  • 财政年份:
    2016
  • 资助金额:
    --
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
Orientational microrheology (B05)
定向微流变学(B05)
  • 批准号:
    313434079
  • 财政年份:
    2016
  • 资助金额:
    --
  • 项目类别:
    Collaborative Research Centres
Spatial parallel mechanisms with large orientational capabilities - market assessment
具有大定向能力的空间并行机构-市场评估
  • 批准号:
    505846-2017
  • 财政年份:
    2016
  • 资助金额:
    --
  • 项目类别:
    Idea to Innovation
Reaction control and transition state search via the multidimensional orientational vector correlation
通过多维定向矢量相关的反应控制和过渡态搜索
  • 批准号:
    16KT0056
  • 财政年份:
    2016
  • 资助金额:
    --
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
multidimensional obervation of orientational vector correlation and the resonance on the scattering partial wave in the cold radical reaction
冷自由基反应中取向矢量相关性和散射分波共振的多维观测
  • 批准号:
    15K13624
  • 财政年份:
    2015
  • 资助金额:
    --
  • 项目类别:
    Grant-in-Aid for Challenging Exploratory Research
Intermediate Structures between Lamellar and Onion Phases under Shear Flow and Long-range Orientational Order
剪切流和长程取向有序下层状相和洋葱相之间的中间结构
  • 批准号:
    15H03711
  • 财政年份:
    2015
  • 资助金额:
    --
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
The study on an orientational control of a molecule ion with a porous crystal film
多孔晶体薄膜分子离子取向控制的研究
  • 批准号:
    25790084
  • 财政年份:
    2013
  • 资助金额:
    --
  • 项目类别:
    Grant-in-Aid for Young Scientists (B)
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