EAGER: Exploratory Research on the Micron Automata Processor
EAGER: Exploratory Research on the Micron Automata Processor
批准号:
1448333
负责人:
Srinivas Aluru
金额:
$30.0万
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2014
资助国家:
美国
项目状态:
已结题
起止时间:
2014-08-15 至 2019-07-31
中文摘要
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英文摘要
The Micron Automata Processor is a reconfigurable non-Von Neumann co-processor which can be used to simultaneously execute multiple Non-deterministic Finite Automata over one or more input data streams. The technology supports an algorithmic model and a programming abstraction that is radically different from any processor or co-processor that is in existence today. The goal of this exploratory project is to conduct early-concept research on the Automata Processor so that the research community has access to techniques and tools for utilizing the technology. The project is developing algorithmic building blocks, programming techniques, and libraries for enabling researchers and developers to take advantage of this new architectural paradigm, and designing automata-based algorithms to solve path problems in graphs as a step towards exploring general purpose use of this architecture. The project will lead to fundamental research on how to solve problems using a new computational model. Research results will be shared through publications and release of automata libraries, to enable rapid adoption of this new technology by the computing community.
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Parallel Interval Stabbing on the Automata Processor
自动机处理器上的并行间隔刺伤
DOI:
10.1109/ia3.2016.008
发表时间:
2016
期刊:
2016 6th Workshop on Irregular Applications: Architecture and Algorithms (IA3
影响因子:
--
作者:
[Roy, Indranil, Srivastava, Ankit, Grimm, Matt, Aluru, Srinivas]
通讯作者:
Aluru, Srinivas
DOI:
10.1109/ipdps.2016.94
发表时间:
2016-05
期刊:
2016 IEEE International Parallel and Distributed Processing Symposium (IPDPS)
影响因子:
--
作者:
[Indranil Roy;Ankit Srivastava;Marziyeh Nourian;M. Becchi;S. Aluru]
通讯作者:
Indranil Roy;Ankit Srivastava;Marziyeh Nourian;M. Becchi;S. Aluru
Interval stabbing on the Automata Processor
自动机处理器上的间隔刺伤
DOI:
10.1016/j.jpdc.2018.01.010
发表时间:
2020
期刊:
Journal of Parallel and Distributed Computing
影响因子:
3.8
作者:
[Roy, Indranil, Srivastava, Ankit, Grimm, Matt, Aluru, Srinivas]
通讯作者:
Aluru, Srinivas
DOI:
10.1109/icpp.2016.30
发表时间:
2016
期刊:
2016 45th International Conference on Parallel Processing (ICPP
影响因子:
--
作者:
[Roy, Indranil, Srivastava, Ankit, Aluru, Srinivas]
通讯作者:
Aluru, Srinivas
Evaluating High Performance Pattern Matching on the Automata Processor
评估自动机处理器上的高性能模式匹配
DOI:
10.1109/tc.2019.2901466
发表时间:
2019
期刊:
IEEE Transactions on Computers
影响因子:
3.7
作者:
[Roy, Indranil, Srivastava, Ankit, Grimm, Matt, Nourian, Marziyeh, Becchi, Michela, Aluru, Srinivas]
通讯作者:
Aluru, Srinivas
A scalable integrated multi-modal single cell analysis framework for gene regulatory and cell-cell interaction networks
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批准号:2233887
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项目类别:Continuing Grant
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资助金额:$54.58万
-
财政年份:2023
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负责人:Srinivas Aluru
-
依托单位:
BD Hubs: Collaborative Proposal: SOUTH:The South Big Data Innovation Hub
-
批准号:1916589
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项目类别:Cooperative Agreement
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资助金额:$203.16万
-
财政年份:2019
-
负责人:Srinivas Aluru
-
依托单位:
AF: Small: Algorithmic Techniques for High-throughput Analysis of Long Reads
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批准号:1816027
-
项目类别:Standard Grant
-
资助金额:$42.5万
-
财政年份:2018
-
负责人:Srinivas Aluru
-
依托单位:
EAGER: A Framework for Learning Graph Algorithms with Applications to Social and Gene Networks
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批准号:1841351
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项目类别:Standard Grant
-
资助金额:$30.0万
-
财政年份:2018
-
负责人:Srinivas Aluru
-
依托单位:
MRI: Acquisition of an HPC System for Data-Driven Discovery in Computational Astrophysics, Biology, Chemistry, and Materials Science
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批准号:1828187
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项目类别:Standard Grant
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资助金额:$369.93万
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财政年份:2018
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负责人:Srinivas Aluru
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依托单位:
Big Data Regional Innovation Hubs and Spokes Workshop
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批准号:1736154
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项目类别:Standard Grant
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资助金额:$3.31万
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财政年份:2017
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负责人:Srinivas Aluru
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依托单位:
SHF:Small: Reproducibility and Comprehensive Assessment of Next Generation Sequencing Bioinformatics Software
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批准号:1718479
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项目类别:Standard Grant
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资助金额:$50.0万
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财政年份:2017
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负责人:Srinivas Aluru
-
依托单位:
AF: Medium: Collaborative Research: Sequential and Parallel Algorithms for Approximate Sequence Matching with Applications to Computational Biology
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批准号:1704552
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项目类别:Standard Grant
-
资助金额:$52.5万
-
财政年份:2017
-
负责人:Srinivas Aluru
-
依托单位:
BD Hubs: Collaborative Proposal: SOUTH: A Big Data Innovation Hub for the South Region
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批准号:1550305
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项目类别:Standard Grant
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资助金额:$62.56万
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财政年份:2015
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负责人:Srinivas Aluru
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依托单位:
Collaborative Research: ABI Innovation: Towards high-performance flexible transcription factor-DNA docking
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批准号:1356065
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项目类别:Continuing Grant
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资助金额:$15.67万
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财政年份:2014
-
负责人:Srinivas Aluru
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依托单位:
Collaborative Research:XPS:CLCCA: Performance Portable Abstractions for Large-Scale Irregular Computations
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批准号:1361053
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项目类别:Standard Grant
-
资助金额:$30.0万
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财政年份:2013
-
负责人:Srinivas Aluru
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依托单位:
Collaborative Research:XPS:CLCCA: Performance Portable Abstractions for Large-Scale Irregular Computations
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批准号:1337165
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项目类别:Standard Grant
-
资助金额:$30.0万
-
财政年份:2013
-
负责人:Srinivas Aluru
-
依托单位:
BIGDATA: Mid-Scale: DA: Collaborative Research: Genomes Galore - Core Techniques, Libraries, and Domain Specific Languages for High-Throughput DNA Sequencing
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批准号:1416259
-
项目类别:Standard Grant
-
资助金额:$123.32万
-
财政年份:2013
-
负责人:Srinivas Aluru
-
依托单位:
AF: Medium: Parallel Algorithms and Software for High-Throughput Sequence Assembly
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批准号:1360593
-
项目类别:Continuing Grant
-
资助金额:$92.52万
-
财政年份:2013
-
负责人:Srinivas Aluru
-
依托单位:
BIGDATA: Mid-Scale: DA: Collaborative Research: Genomes Galore - Core Techniques, Libraries, and Domain Specific Languages for High-Throughput DNA Sequencing
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批准号:1247716
-
项目类别:Standard Grant
-
资助金额:$130.0万
-
财政年份:2013
-
负责人:Srinivas Aluru
-
依托单位:
AF: Medium: Parallel Algorithms and Software for High-Throughput Sequence Assembly
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批准号:1162472
-
项目类别:Continuing Grant
-
资助金额:$100.0万
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财政年份:2012
-
负责人:Srinivas Aluru
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依托单位:
AF: Small: Parallel Methods for Large, Atomic-scale Quantitative Analysis of Materials
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批准号:0917202
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项目类别:Standard Grant
-
资助金额:$49.78万
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财政年份:2009
-
负责人:Srinivas Aluru
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依托单位:
SGER: Exploring Timescale Parallelization for Long-timescale Molecular Dynamics
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批准号:0835466
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项目类别:Standard Grant
-
资助金额:$0.0万
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财政年份:2008
-
负责人:Srinivas Aluru
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依托单位:
CRI: IAD Acquisition of a Cluster and High Performance Storage for data-intensive applications in Materials Science, Power Systems and Systems Biology
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批准号:0751157
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项目类别:Standard Grant
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资助金额:$71.9万
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财政年份:2008
-
负责人:Srinivas Aluru
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依托单位:
CPA-ACR: Parallel Algorithms and Software for Large Scale Microarry Data Analysis and Gene Network Inference
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批准号:0811804
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项目类别:Continuing Grant
-
资助金额:$37.5万
-
财政年份:2008
-
负责人:Srinivas Aluru
-
依托单位:
海外基金