Mass spectrometric based analysis of plasma membrane proteins that regulate cell expansion in Arabidopsis thaliana.
Mass spectrometric based analysis of plasma membrane proteins that regulate cell expansion in Arabidopsis thaliana.
批准号:
1713899
负责人:
Michael Sussman
金额:
$45.0万
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2017
资助国家:
美国
项目状态:
已结题
起止时间:
2017-06-15 至 2019-05-31
中文摘要
存在于细胞外膜中的分子充当感知环境变化的天线,并通过化学反应(例如磷酸化)和形状(或构象)的变化将此信息传递到细胞中。新开发的技术允许使用质谱法检测分子中的这种构象变化,在该项目中,这些新技术将用于了解信号如何调节植物细胞大小的快速扩张。将为高中生开发练习,使用质谱法分析大豆豆腐等常见食物蛋白质。美国公共广播公司(PBS)的一部电视连续剧《实验室的星期三之夜》(Wednesday Nite at the Lab)将在威斯康星州大学生物技术中心免费播出,它将以植物蛋白质的分析为例,向公众解释质谱法(并揭开质谱法的神秘面纱),并解释这对他们日常生活的影响。总的来说,这个项目旨在联合收割机在体外和体内的方法来了解跨质膜信号传输的分子基础。该项目的重点是Feronia,一种植物质膜受体激酶,及其肽激素配体RALF。当RALF结合到Feronia的细胞外结构域时,细胞扩增的速率在几分钟内降低。本项目将开发和应用新的基于质谱的工具,用于分析细胞外RALF诱导的费罗尼亚构象变化。新设计的生物分子等离子体诱导修饰仪(Plasma Induced Modification of Biomolecules)可产生微秒级的羟基自由基脉冲,将用于在质膜上“足迹”Feronia和其他参与Feronia/RALF作用的蛋白质。
英文摘要
Molecules present in the outer membranes of cells act as antennae to perceive changes in the environment, and transmit this information into the cell by chemical reactions (for example phosphorylation) and by changes in shape (or conformation.) Newly developed technologies allow such conformational changes in molecules to be detected using the methods of mass spectrometry, and in this project these new technologies will be used to understand how signals regulate the rapid expansion of plant cell size. Exercises will be developed for high school students, using mass spectrometry to analyze common food proteins such as soybean tofu. A PBS television series "Wednesday Nite at the Lab" that is broadcast free from the University of Wisconsin Biotechnology Center will explain to the general public (and demystify) mass spectrometry, using as an example the analysis of plant proteins and explaining how this impacts their everyday lives. Overall this project seeks to combine in vitro and in vivo approaches to understanding the molecular basis for signal transmission across the plasma membrane. The focus of this project is Feronia, a plant plasma membrane receptor kinase, and its peptide hormone ligand, RALF. When RALF binds to the extracellular domain of Feronia, the rate of cell expansion is reduced within minutes. This project will develop and apply novel mass spectrometric based tools for analyzing the conformational changes that extracellular RALF induces in Feronia. The newly devised PLIMB instrument (Plasma Induced Modification of Biomolecules) that generates microsecond pulses of hydroxyl radicals will be used to "footprint" Feronia and other proteins that are involved in Feronia/RALF action at the plasma membrane.
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DOI:
10.1074/jbc.m116.761981
发表时间:
2017-04-07
期刊:
JOURNAL OF BIOLOGICAL CHEMISTRY
影响因子:
4.8
作者:
[Minkoff, Benjamin B., Makino, Shin-ichi, Sussman, Michael R.]
通讯作者:
Sussman, Michael R.
Proteome-wide Analysis of Protein Thermal Stability in the Model Higher Plant Arabidopsis thaliana
模型高等植物拟南芥蛋白质热稳定性的全蛋白质组分析
DOI:
10.1074/mcp.ra118.001124
发表时间:
2019
期刊:
Molecular & Cellular Proteomics
影响因子:
7
作者:
[Volkening, Jeremy D., Stecker, Kelly E., Sussman, Michael R.]
通讯作者:
Sussman, Michael R.
Plasma-Generated OH Radical Production for Analyzing Three-Dimensional Structure in Protein Therapeutics
等离子体产生的 OH 自由基产生用于分析蛋白质治疗中的三维结构
DOI:
10.1038/s41598-017
发表时间:
2017
期刊:
Open access scientific reports
影响因子:
--
作者:
[Minkoff BB, Blatz JM]
通讯作者:
Minkoff BB, Blatz JM
DOI:
10.1002/pro.3628
发表时间:
2019-06-01
期刊:
PROTEIN SCIENCE
影响因子:
8
作者:
[Frederick, Ronnie O., Haruta, Miyoshi, Markley, John L.]
通讯作者:
Markley, John L.
DOI:
10.1104/pp.17.01126
发表时间:
2018-01-01
期刊:
PLANT PHYSIOLOGY
影响因子:
7.4
作者:
[Haruta, Miyoshi, Tan, Li Xuan, Sussman, Michael R.]
通讯作者:
Sussman, Michael R.
TRTech-PGR: A mass spectrometric-based interdisciplinary approach to deciphering the molecular dialogue between between crop plants and their microbial friends and foes.
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批准号:2010789
-
项目类别:Continuing Grant
-
资助金额:$302.7万
-
财政年份:2020
-
负责人:Michael Sussman
-
依托单位:
EAGER: Genetically Encoded Crosslinking Reagents to Map Protein Interaction Surfaces In Planta
-
批准号:1943816
-
项目类别:Standard Grant
-
资助金额:$30.0万
-
财政年份:2019
-
负责人:Michael Sussman
-
依托单位:
RESEARCH PGR: An interdisciplinary approach to deciphering molecular signaling pathways controlling plant-symbiont associations in legumes and cereals.
-
批准号:1546742
-
项目类别:Continuing Grant
-
资助金额:$270.77万
-
财政年份:2016
-
负责人:Michael Sussman
-
依托单位:
An Isotope-Assisted Quantitative Phosphoproteomic Analysis of Signaling Pathways Initiated at the Plasma Membrane of Arabidopsis thaliana
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批准号:1410164
-
项目类别:Continuing Grant
-
资助金额:$134.73万
-
财政年份:2014
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负责人:Michael Sussman
-
依托单位:
An Interdisciplinary Approach to Deciphering the Molecular Dialogue between the Plasma Membrane and Nucleus of Medicago truncatula
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批准号:1237936
-
项目类别:Continuing Grant
-
资助金额:$338.49万
-
财政年份:2012
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负责人:Michael Sussman
-
依托单位:
2012 Plant Molecular Biology Gordon Research Conference, Holderness School, New Hampshire, July 15-20, 2012
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批准号:1240311
-
项目类别:Standard Grant
-
资助金额:$1.01万
-
财政年份:2012
-
负责人:Michael Sussman
-
依托单位:
EAGER: Synthetic Biology Approach to Creating an Artificial Electrocyte
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批准号:1144012
-
项目类别:Continuing Grant
-
资助金额:$30.0万
-
财政年份:2011
-
负责人:Michael Sussman
-
依托单位:
2010 Plant Molecular Biology Gordon Research Conference held at Holderness School in Plymouth, New Hampshire July 18-23, 2010.
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批准号:1019157
-
项目类别:Standard Grant
-
资助金额:$1.0万
-
财政年份:2010
-
负责人:Michael Sussman
-
依托单位:
Arabidopsis 2010: An Isotope-Assisted Quantitative Phosphoproteomics Approach to AtHK1-Mediated Osmosignaling in Arabidopsis thaliana
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批准号:0929395
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项目类别:Continuing Grant
-
资助金额:$120.0万
-
财政年份:2009
-
负责人:Michael Sussman
-
依托单位:
An Interdisciplinary Approach to Deciphering the Molecular Dialogue between the Plasma Membrane and Cytoplasm of Medicago truncatula
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批准号:0701846
-
项目类别:Standard Grant
-
资助金额:$246.22万
-
财政年份:2007
-
负责人:Michael Sussman
-
依托单位:
Isotope-Assisted Proteomic Analysis of Hormone Receptor Mutants
-
批准号:0448369
-
项目类别:Continuing Grant
-
资助金额:$0.0万
-
财政年份:2005
-
负责人:Michael Sussman
-
依托单位:
Acquisition of a MALDI-TOFTOF Mass Spectrometer for Wisconsin Researchers
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批准号:0520825
-
项目类别:Standard Grant
-
资助金额:$69.88万
-
财政年份:2005
-
负责人:Michael Sussman
-
依托单位:
Arabidopsis 2010: The Endgame for Reverse Genetics: Isolation and Distribution of a Knockout Mutant for Every Gene in Arabidopsis.
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批准号:0116945
-
项目类别:Standard Grant
-
资助金额:$169.86万
-
财政年份:2002
-
负责人:Michael Sussman
-
依托单位:
Coordination of the multinational Arabidopsis functional genomics research
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批准号:0132432
-
项目类别:Standard Grant
-
资助金额:$19.93万
-
财政年份:2001
-
负责人:Michael Sussman
-
依托单位:
Conference: 12th International Conference on Arabidopsis Research, University of Wisconsin, June 23 - 27, 2001
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批准号:0117520
-
项目类别:Continuing Grant
-
资助金额:$1.5万
-
财政年份:2001
-
负责人:Michael Sussman
-
依托单位:
Acquisition of a MALDI-TOF Mass Spectrometer for Analysis of the Proteome of the Model Plant, Arabidopsis Thaliana
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批准号:9977525
-
项目类别:Standard Grant
-
资助金额:$31.97万
-
财政年份:1999
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负责人:Michael Sussman
-
依托单位:
U.S.-Germany Cooperative Research: Analysis of Phospholipase A2 Signal Transduction by Reverse Genetics in Arabidopsis
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批准号:9815903
-
项目类别:Standard Grant
-
资助金额:$0.66万
-
财政年份:1999
-
负责人:Michael Sussman
-
依托单位:
Isolation of Knock-out Plants for Analyzing the In Situ Function of Potassium Channels in the Plasma Membrane of Arabidopsis thaliana
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批准号:9728563
-
项目类别:Continuing Grant
-
资助金额:$30.0万
-
财政年份:1998
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负责人:Michael Sussman
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依托单位:
SGER: A High Throughput Assay for Plant Peptide Growth Factors"
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批准号:9706552
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项目类别:Standard Grant
-
资助金额:$5.0万
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财政年份:1997
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负责人:Michael Sussman
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依托单位:
Aquisition of a DNA Sequencer for Plant Molecular Biology Research
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批准号:9419876
-
项目类别:Standard Grant
-
资助金额:$7.57万
-
财政年份:1995
-
负责人:Michael Sussman
-
依托单位:
海外基金