MRI: Development of a Multimodal Instrument for Simultaneous Mechanical and Fluorescence Spectroscopy Measurements of Single Molecules and Molecular Aggregates
MRI: Development of a Multimodal Instrument for Simultaneous Mechanical and Fluorescence Spectroscopy Measurements of Single Molecules and Molecular Aggregates
批准号:
1919670
负责人:
Ionel Popa
金额:
$98.37万
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2019
资助国家:
美国
项目状态:
已结题
起止时间:
2019-10-01 至 2023-09-30
中文摘要
威斯康星大学密尔沃基分校(UWM)获得了一项奖励,以支持多模态仪器的开发,用于同时测量单分子和分子聚集体的机械和荧光光谱。该仪器将使分子和细胞生物学、高通量药物筛选和细胞分析以及新生物材料开发领域的前沿研究和教育成为可能。这台新仪器将成为生物物理微光谱学设施的一部分,并将为威斯康星大学的几个实验室以及当地、国内和国外的其他机构提供服务。在让代表性不足的少数族裔参与STEM,并在其研究项目中培训研究生、本科生和高中生方面取得了良好的记录,这些pi将利用这个项目来教育下一代科学家和工程师。在开发阶段,本科生、研究生和博士后研究人员将参与设计、定制制造、计算机编程以及成像、单分子光谱和数据分析新协议的开发。该项目还将涉及密尔沃基地区的中学生和高中生,并将分别用于示范目的和试点数据采集和分析。一旦建成,该设施将为众多早期职业和高级研究人员的研究项目提供新的能力;它还将通过精心设计的外展计划,以及在奖励期间及之后对本科生、研究生和研究生的教学和培训,在培养未来具有技术素养的劳动力方面发挥重要作用。新的仪器设计将提供给其他有兴趣将这项技术推向市场的研究人员或美国公司。这里开发的仪器结合了磁镊子,这是PI开发的一种技术,用于捕获顺磁珠,并将机械力应用于单个分子和细胞,福斯特共振能量转移(FRET)和荧光光谱,这是co-PI开发的一种方法,用于研究分子和聚集体之间的相互作用,具有光谱分辨率。这种混合仪器目前还没有商业化,并且需要几个劳动密集型的步骤,例如定制零件的设计和制造,光学校准和优化,集成控制软件接口等。这个仪器有一些独特的特点。力和荧光光谱的并行实现将允许在机械扰动下测量单分子荧光,光谱分辨率约为3nm(超过大部分可见光谱),力分辨率为0.1 pN(在nN范围内),采样时间为小时至天。PI组建的多学科团队非常适合开发和验证这项技术,并结合了精湛的技术专长、设备、开发和运行成像设备的经验,以及物理学家、生物学家和其他生命科学家之间的密切合作。该仪器将用于各种研究,涉及受控静态或动态力情况下蛋白质之间的横向相互作用,以及不同或相同类型的自由扩散分子,例如,研究力诱导的配体结合,折叠中间体,单分子水平的抗体检测,受体-受体结合和受体-配体相互作用。该项目由综合活动办公室主要研究仪器计划和分子和细胞生物科学部的分子生物物理集群共同资助。该奖项反映了美国国家科学基金会的法定使命,并通过使用基金会的知识价值和更广泛的影响审查标准进行评估,被认为值得支持。
英文摘要
An award is made to the University of Wisconsin-Milwaukee (UWM) to support the development of multimodal instrument for simultaneous mechanical and fluorescence spectroscopy measurements of single molecules and molecular aggregates. This instrument will enable cutting-edge research and education in the areas of molecular and cellular biology, high-throughput drug screening and cellular analysis, and development of new biomaterials. This new instrument will be part of the Biophysical Microspectroscopy Facility and will serve several laboratories at UWM, as well as other institutions locally, nationally and abroad. Building on their strong record of involving underrepresented minorities in STEM and training graduate, undergraduate and high school students in their research programs, the PIs will use this project to also educate the next generation of scientists and engineers. During the development phase, undergraduate, graduate and postdoctoral researchers will be involved in the design, custom-manufacturing, computer programming, and development of new protocols for imaging, single molecule spectroscopy and for data analysis. This project will also involve middle school and high school students from the Milwaukee area, and will be used for demonstration purposes and for pilot data acquisition and analysis, respectively. Once completed, this facility will provide novel capabilities to the research programs of numerous early-career and senior investigators; it will also play an essential role in preparing the technologically literate workforce of the future, through elaborate outreach programs, as well as teaching and training of undergraduate, graduate, and post-graduate students that will run during the award period and beyond. The new instrument design will be made available to other researchers or US companies interested in bringing this technology to market.The instrument developed here combines magnetic tweezers, a technique developed by the PI to trap paramagnetic beads and apply mechanical forces to single molecules and cells with Forster resonance energy transfer (FRET) and fluorescence spectroscopy, a method developed by the co-PI to study interactions between molecules and aggregates with spectral resolution. Such a hybrid instrument is not currently commercially available and will require several labor-intensive steps, such as design and fabrication of custom parts, optical alignment and optimization, an integrated control software interface, etc. This instrument presents some unique features. The parallel implementation of force and fluorescence spectroscopy will allow measurements of single-molecule fluorescence with spectral resolution of about 3 nm (over most of the visible spectrum) under mechanical perturbation with a force resolution of 0.1 pN up in the nN range and over hour-to-days sampling times. The multidisciplinary team assembled by the PI is ideally suited to develop and validate this technology, and combines exquisite technical expertise, facilities, experience with developing and running an imaging facility, and close collaborations between physicists, biologists and other life scientists. The instrument will be used for a variety of research studies that involve lateral interactions between proteins under controlled static or dynamic force situations and freely diffusing molecules of a different or the same type, e.g., to study force-induced ligand binding, folding intermediates, antibody detection at single molecule level, receptor-receptor association, and receptor-ligand interactions. The project is jointly funded by the Office of Integrative Activities Major Research Instrumentation Program and the Molecular Biophysics Cluster in the Division of Molecular and Cellular Biosciences.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
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DOI:
10.1016/j.saa.2021.120133
发表时间:
2021-07-07
期刊:
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY
影响因子:
4.4
作者:
[Adhikari, Dhruba P., Biener, Gabriel, Raicu, Valerica]
通讯作者:
Raicu, Valerica
DOI:
10.1088/2050-6120/ab9b68
发表时间:
2020-06
期刊:
Methods and Applications in Fluorescence
影响因子:
3.2
作者:
[M. Stoneman;G. Biener;V. Raicu]
通讯作者:
M. Stoneman;G. Biener;V. Raicu
DOI:
10.1016/j.jbc.2022.102370
发表时间:
2022-10
期刊:
JOURNAL OF BIOLOGICAL CHEMISTRY
影响因子:
4.8
作者:
[Zapata-Mercado, Elmer, Biener, Gabriel, McKenzie, Daniel M., Wimley, William C., Pasquale, Elena B., Raicu, Valerica, Hristova, Kalina]
通讯作者:
Hristova, Kalina
In-Cell Detection of Conformational Substates of a G Protein-Coupled Receptor Quaternary Structure: Modulation of Substate Probability by Cognate Ligand Binding
G 蛋白偶联受体四级结构构象亚态的细胞内检测:通过同源配体结合调节亚态概率
DOI:
10.1021/acs.jpcb.0c06081
发表时间:
2020
期刊:
The Journal of Physical Chemistry B
影响因子:
--
作者:
[Paprocki, Joel, Biener, Gabriel, Stoneman, Michael, Raicu, Valerică]
通讯作者:
Raicu, Valerică
Using Magnets and Flexible 3D-Printed Structures to Illustrate Protein (Un)folding
使用磁铁和灵活的 3D 打印结构来说明蛋白质(解)折叠
DOI:
10.1021/acs.jchemed.2c00231
发表时间:
2022
期刊:
Journal of Chemical Education
影响因子:
3
作者:
[Popa, Ionel, Saitis, Florin]
通讯作者:
Saitis, Florin
共 12 条
CAREER: Mechanical unfolding and refolding of multidomain proteins as a new signaling mechanism, studied using a novel single molecule approach
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批准号:1846143
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项目类别:Continuing Grant
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资助金额:$74.17万
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财政年份:2019
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负责人:Ionel Popa
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依托单位:
国内基金
海外基金
水稻边界发育缺陷突变体abnormal boundary development(abd)的基因克隆与功能分析
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批准号:32070202
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项目类别:面上项目
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资助金额:58.0万元
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批准年份:2020
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负责人:汪泉
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依托单位:
Development of a Linear Stochastic Model for Wind Field Reconstruction from Limited Measurement Data
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项目类别:--
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资助金额:40万元
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批准年份:2020
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负责人:Vikrant Gupta
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依托单位: