EarthCube Data Capabilities: Collaborative Research: Integration of Reproducibility into Community CyberInfrastructure
EarthCube Data Capabilities: Collaborative Research: Integration of Reproducibility into Community CyberInfrastructure
批准号:
1928369
负责人:
David Tarboton
金额:
$30.57万
依托单位:
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2019
资助国家:
美国
项目状态:
已结题
起止时间:
2019-09-01 至 2023-08-31
中文摘要
点击翻译按钮获取中文摘要
英文摘要
For science to reliably support new discoveries, its results must be reproducible. This has proven to be a challenge in many fields including, most notably, fields that rely on computational studies as a means for supporting new discoveries. Reproducibility in these studies is particularly difficult because they require open sharing of data and models and careful control by the original researcher. This is to ensure that products can be run on later generations of hardware and software and produce consistent results. This project will develop software that helps support computational reproducibility and makes it easier and more efficient for geoscientists to preserve, share, repeat and replicate scientific computations. The Broader Impacts of this project include a collaboration between computer scientists, hydrologists and the Consortium of Universities for the Advancement of Hydrologic Science Inc. (CUAHSI) for the hydrology research community. With over 3500 users, and holding over 8000 model and data resources, this collaboration will bring improved tools and best practices to a broad and diverse community of geoscientists. Beyond hydrology, the methods and tools developed as part of this project have the potential to be extended to the solid Earth and space science geoscience domains. They also have the potential to inform the reproducibility evaluation process as currently undertaken by journals and publishers. The projct will also conduct workshops to train researchers and be used in the classroom at Utah Sate Universtiy, DePaul University and the University of Virginia. Emphasis on the importance of research reproducibility is steadily rising, however many studies still continue to not be reproducible. Reproducibility in computational studies is particularly difficult because of the challenges involved in completely documenting the data, models and procedures used together with the underlying hardware and software dependencies. The reproducibility workbench software (ReproBench) developed in this project will address reproducibility questions by establishing a container-based reproducible workflow that will make it easy and efficient for geoscientists to verify scientific results. Automation and documentation are two key methods for improving verification and, in general, the conduct of reproducible science. This project will build-from past investments: (I) automated containerization methods, through the Sciunit project, and (II) well-documented, community-adopted interfaces, through HydroShare, and bring these investments together to establish a novel, robust, and reproducible workflow. By applying this workflow to water-related science use cases, this project will demonstrate how to preserve, share, repeat, and replicate scientific results. The interfaces can become an exemplar for other community cyberinfrastructure that, akin to Hydrology, aims to share data and models at a large scale. In establishing this workflow, the ReproBench project team combines expertise in cyberinfrastructure, domain science, and reproducible computational data science. By leveraging Sciunit, ReproBench brings formal methods for the conduct of reproducible computational science into the geosciences.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
期刊论文(6)
专著(0)
科研奖励(0)
会议论文
登录
查看更多内容
Building cyberinfrastructure for the reuse and reproducibility of complex hydrologic modeling studies
构建网络基础设施以实现复杂水文模型研究的重用和可重复性
DOI:
10.1016/j.envsoft.2023.105689
发表时间:
2023
期刊:
Environmental Modelling & Software
影响因子:
4.9
作者:
[Maghami, Iman, Van Beusekom, Ashley, Hay, Lauren, Li, Zhiyu, Bennett, Andrew, Choi, YoungDon, Nijssen, Bart, Wang, Shaowen, Tarboton, David, Goodall, Jonathan L.]
通讯作者:
Goodall, Jonathan L.
DOI:
10.1016/j.envsoft.2020.104753
发表时间:
2020
期刊:
Environmental Modelling & Software
影响因子:
4.9
作者:
[Essawy, Bakinam T., Goodall, Jonathan L., Voce, Daniel, Morsy, Mohamed M., Sadler, Jeffrey M., Choi, Young Don, Tarboton, David G., Malik, Tanu]
通讯作者:
Malik, Tanu
DOI:
10.1016/j.envsoft.2020.104888
发表时间:
2021-01-01
期刊:
ENVIRONMENTAL MODELLING & SOFTWARE
影响因子:
4.9
作者:
[Choi, Young-Don, Goodall, Jonathan L., Tarboton, David G.]
通讯作者:
Tarboton, David G.
The Next Frontier: Making Research More Reproducible
下一个前沿:使研究更具可重复性
DOI:
10.1061/(asce)wr.1943-5452.0001215
发表时间:
2020
期刊:
Journal of Water Resources Planning and Management
影响因子:
3.1
作者:
[Rosenberg, David E., Filion, Yves, Teasley, Rebecca, Sandoval-Solis, Samuel, Hecht, Jory S., van Zyl, Jakobus E., McMahon, George F., Horsburgh, Jeffery S., Kasprzyk, Joseph R., Tarboton, David G.]
通讯作者:
Tarboton, David G.
Comparing containerization-based approaches for reproducible computational modeling of environmental systems
比较基于容器化的环境系统可重复计算建模方法
DOI:
10.1016/j.envsoft.2023.105760
发表时间:
2023
期刊:
Environmental Modelling & Software
影响因子:
4.9
作者:
[Choi, Young-Don, Roy, Binata, Nguyen, Jared, Ahmad, Raza, Maghami, Iman, Nassar, Ayman, Li, Zhiyu, Castronova, Anthony M., Malik, Tanu, Wang, Shaowen]
通讯作者:
Wang, Shaowen
共 6 条
Collaborative Research: Framework: Software: NSCI : Computational and data innovation implementing a national community hydrologic modeling framework for scientific discovery
-
批准号:1835569
-
项目类别:Standard Grant
-
资助金额:$34.0万
-
财政年份:2018
-
负责人:David Tarboton
-
依托单位:
Collaborative Research: SI2-SSI: Cyberinfrastructure for Advancing Hydrologic Knowledge through Collaborative Integration of Data Science, Modeling and Analysis
-
批准号:1664061
-
项目类别:Standard Grant
-
资助金额:$276.0万
-
财政年份:2017
-
负责人:David Tarboton
-
依托单位:
Collaborative Research: Improving Student Learning in Hydrology & Water Resources Engineering by Enabling the Development, Sharing and Interoperability of Active Learning Resou
-
批准号:1725989
-
项目类别:Standard Grant
-
资助金额:$24.93万
-
财政年份:2017
-
负责人:David Tarboton
-
依托单位:
RAPID:Archiving and Enabling Community Access to Data from Recent US Hurricanes
-
批准号:1761673
-
项目类别:Standard Grant
-
资助金额:$20.0万
-
财政年份:2017
-
负责人:David Tarboton
-
依托单位:
EarthCube Building Blocks: Collaborative Proposal: GeoTrust: Improving Sharing and Reproducibility of Geoscience Applications
-
批准号:1639655
-
项目类别:Standard Grant
-
资助金额:$14.0万
-
财政年份:2016
-
负责人:David Tarboton
-
依托单位:
Collaborative Research: SI2-SSI: An Interactive Software Infrastructure for Sustaining Collaborative Community Innovation in the Hydrologic Sciences
-
批准号:1148453
-
项目类别:Standard Grant
-
资助金额:$240.19万
-
财政年份:2012
-
负责人:David Tarboton
-
依托单位:
Collaborative Research: Development of Adaptable Web Modules to Stimulate Active Learning in Hydrology using Data and Model Simulations
-
批准号:1122812
-
项目类别:Standard Grant
-
资助金额:$10.62万
-
财政年份:2011
-
负责人:David Tarboton
-
依托单位:
U.S.-New Zealand Cooperative Research: Spatially Distributed Hydrologic Models and Spatial Patterns
-
批准号:9724720
-
项目类别:Standard Grant
-
资助金额:$1.39万
-
财政年份:1997
-
负责人:David Tarboton
-
依托单位:
Geomorphological Processes, Scale and the Evolution of Fluvial Landforms
-
批准号:9318977
-
项目类别:Standard Grant
-
资助金额:$4.42万
-
财政年份:1994
-
负责人:David Tarboton
-
依托单位:
国内基金
海外基金
登录
查看更多内容
Scalable Learning and Optimization: High-dimensional Models and Online Decision-Making Strategies for Big Data Analysis
-
批准号:--
-
项目类别:合作创新研究团队
-
资助金额:--
-
批准年份:2024
-
负责人:姚韬
-
依托单位:
Data-driven Recommendation System Construction of an Online Medical Platform Based on the Fusion of Information
-
批准号:--
-
项目类别:外国青年学者研究基金项目
-
资助金额:--
-
批准年份:2024
-
负责人:江洋子
-
依托单位:
Development of a Linear Stochastic Model for Wind Field Reconstruction from Limited Measurement Data
-
批准号:--
-
项目类别:--
-
资助金额:40万元
-
批准年份:2020
-
负责人:Vikrant Gupta
-
依托单位:
基于Linked Open Data的Web服务语义互操作关键技术
-
批准号:61373035
-
项目类别:面上项目
-
资助金额:77.0万元
-
批准年份:2013
-
负责人:冯志勇
-
依托单位:
Molecular Interaction Reconstruction of Rheumatoid Arthritis Therapies Using Clinical Data
-
批准号:31070748
-
项目类别:面上项目
-
资助金额:34.0万元
-
批准年份:2010
-
负责人:Christine Nardini
-
依托单位:
高维数据的函数型数据(functional data)分析方法
-
批准号:11001084
-
项目类别:青年科学基金项目
-
资助金额:16.0万元
-
批准年份:2010
-
负责人:周迎春
-
依托单位:
染色体复制负调控因子datA在细胞周期中的作用
-
批准号:31060015
-
项目类别:地区科学基金项目
-
资助金额:25.0万元
-
批准年份:2010
-
负责人:莫日根
-
依托单位:
Computational Methods for Analyzing Toponome Data
-
批准号:60601030
-
项目类别:青年科学基金项目
-
资助金额:17.0万元
-
批准年份:2006
-
负责人:Axel Mosig
-
依托单位: