Low temperature adaptation of hyperthermophile
Low temperature adaptation of hyperthermophile
批准号:
17613007
负责人:
FUJIWARA Shinsuke
金额:
$2.37万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (C)
财政年份:
2005
资助国家:
日本
项目状态:
已结题
起止时间:
2005 至 2006
中文摘要
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英文摘要
Both Thermococcus and Pyrococcus species belong to the Thermococcales order and share various physiological features. They grow near or above at 100℃ and are strictly anaerobic heterotrophs that utilize a variety of carbon substrates, such as peptides and/or carbohydrates. The unique difference is the growth temperature range. For example, the minimum growth temperatures of Thermococcus spp. (ex. Thermococcus kodakaraensis, 60℃) are generally lower than those of Pyrococcus spp. (P.abyssi, 67℃ ; P.furiosus, 70℃ ; P.horikoshii, 80℃). Thermococcus kodakarensis possesses a single circular genome and 747 genes are unique in T.kodakaraensis that are not identified in Pyrococcus spp. Some of these genes are considered to be involved in low temperature survival in T. kodakaraensis. Transcriptome and proteome studies revealed that some genes are induced specifically at low temperature environment. Among them, we mainly focused on chaperonin CpkA and RNA helicase (Tk0306) and their induction pro … More files were analyzed. The expression of low temperature inducible chaperonin cpkA was regulated at the post-transcriptional level. In contrast, high temperature inducible chaperonin cpkB was regulated at the level of transcription. When we compare promoter sequences of cpkA and cpkB, only slight difference was observed, suggesting that these genes were evolved from the same common ancestor and only cpkA acquired low temperature inducible mechanism in the course of evolution. As for RNA helicase, it was regulated at the level of transcription. RNA helicase showed highest enzymatic activity at 50℃. It is unusual because Tkodakaraensis does not grow at the temperature. The RNA helicase seems functional in T. kodakaraensis only to survival at low temperature environments. Further study is needed to confirm the idea. Besides these two genes, enzymatic characteristics for isopentenyl diphasphate isomerase, glucosamine-6-phosphate deaminase, methylguanine-DNA methyltransferase and homing endnuclasell were examined. Less
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DOI:
10.1101/gr.3003105
发表时间:
2005-03-01
期刊:
GENOME RESEARCH
影响因子:
7
作者:
[Fukui, T, Atomi, H, Imanaka, T]
通讯作者:
Imanaka, T
Crystal structure of intein homing endonuclease ll encoded in DNA polymerase gene from Hyperthermophilic Archaeon Thermococcus kodakaraensis strain KOD1.
来自超嗜热古细菌Thermococcus kodakaraensis 菌株KOD1 的DNA 聚合酶基因编码的内含肽归巢核酸内切酶II 的晶体结构。
DOI:
--
发表时间:
2006
期刊:
Proteins 63
影响因子:
--
作者:
[Matsumura, H.]
通讯作者:
H.
耐熱性酵素を利用したイソプレノイド化合物の合成
使用热稳定性酶合成类异戊二烯化合物
DOI:
--
发表时间:
2006
期刊:
バイオサイエンスとインダストリー 64・2
影响因子:
--
作者:
[Takaya N, Katoh Y, Iwabuchi K, Hayashi I, Itoh S, Okumura K, Ra C, Nagaoka I, Daiba H., H.Takeda, Fumihiko Tochinai, 佐藤勝也, 戸田山和久, 斉藤了文, 東端啓貴]
通讯作者:
東端啓貴
Methods in Chemistry, Methods in Chemistry(the fifth edition)Vol.29 Principles of Biotechnology (DNA electrophoresis p139〜p149)
化学方法,化学方法(第五版)Vol.29 生物技术原理(DNA 电泳 p139-p149)
DOI:
--
发表时间:
2006
期刊:
影响因子:
--
作者:
[Suda T, Suzuki Y, Matsui T, Inoue T, Niide O, Yoshimaru T, Suzuki H, Ra C, Ochiai T., 礒崎 初仁, Tanaka M., 小澤守, The Chemical Society of Japan]
通讯作者:
The Chemical Society of Japan
DOI:
10.1002/prot.20858
发表时间:
2006-05-15
期刊:
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
影响因子:
2.9
作者:
[Matsumura, H, Takahashi, H, Kai, Y]
通讯作者:
Kai, Y
共 22 条
Roles of cold-inducible chaperones in hyperthermophiles
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批准号:23580121
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$3.49万
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财政年份:2011
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负责人:FUJIWARA Shinsuke
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依托单位:
Study on homeostasis of hyperthermophiles
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批准号:20580090
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$3.08万
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财政年份:2008
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负责人:FUJIWARA Shinsuke
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依托单位:
海外基金