Adaptation of marine zooplankton to climate change conditions: a multi-omic study of molecular mechanisms.

海洋浮游动物对气候变化条件的适应：分子机制的多组学研究。

• 批准号: 22H03795
• 负责人: ラスカム ニコラス
• 金额: $ 11.15万
• 依托单位: Okinawa Institute of Science and Technology Graduate University
• 依托单位国家: 日本
• 项目类别: Grant-in-Aid for Scientific Research (B)
• 财政年份: 2022
• 资助国家: 日本
• 起止时间: 2022-04-01 至 2025-03-31
• 项目状态: 未结题
• 来源: https://kaken.nii.ac.jp/en/grant/KAKENHI-PROJECT-22H03795/
• 关键词: Bioinformatics; genomics; climate change; marine biology; plankton; bioinformatics

- We showed using molecular, morphological and reproductive analysis that the Okinawa Oikopleura dioica is probably a different species or sub-species to Osaka specimen (Masunaga et al, 2022).- We have recently completed the detailed genome comparisons between the Okinawa and Osaka Oikopleura dioica species (Plessy et al, Submitted).- We have established comparative assays to measure the development rate of Oikopleura dioica in different saline concentrations.- We have performed RNA-seq experiments of different time-points of exposure to different saline conditions.

- 我们使用分子，形态和生殖分析表明，冲绳Oikopleura dioica可能是大坂标本的不同种或亚种（Masunaga等人，2022）。我们最近完成了冲绳和大坂Oikopleura dioica物种之间的详细基因组比较（Plessy等人，提交）。我们已经建立了比较测定法来测量Oikopleura dioica在不同盐水浓度下的发育速率。我们已经进行了暴露于不同盐水条件的不同时间点的RNA-seq实验。

项目成果

Massively scrambled genomes producing animals with conserved morphology

大规模打乱的基因组产生具有保守形态的动物

• 发表时间: 2022
• 作者: Masunaga A;Mansfield MJ;Tan Y;Liu AW;Bliznina A;Barzaghi P;Hodgetts TL;Ferrandez‐Roldan A;Canestro C;Onuma TA;Plessy C and Luscombe NM;Michael Mansfield;Aki Masunaga;Charles Plessy;Michael Mansfield;Charles Plessy
• 通讯作者: Charles Plessy

Oikopleura dioica, the cosmopolitan appendicularian hides multiple cryptic species around the globe

Oikopleura dioica，世界性的阑尾动物，在全球隐藏着多种神秘物种

• 发表时间: 2022
• 作者: Masunaga A;Mansfield MJ;Tan Y;Liu AW;Bliznina A;Barzaghi P;Hodgetts TL;Ferrandez‐Roldan A;Canestro C;Onuma TA;Plessy C and Luscombe NM;Michael Mansfield;Aki Masunaga
• 通讯作者: Aki Masunaga

Uncovering speciation and population structures in the marine zooplankton, Oikopleura dioica

揭示海洋浮游动物 Oikopleura dioica 的物种形成和种群结构

• 发表时间: 2022
• 作者: Masunaga A;Mansfield MJ;Tan Y;Liu AW;Bliznina A;Barzaghi P;Hodgetts TL;Ferrandez‐Roldan A;Canestro C;Onuma TA;Plessy C and Luscombe NM;Michael Mansfield;Aki Masunaga;Charles Plessy;Michael Mansfield;Charles Plessy;Charles Plessy;Aki Masunaga
• 通讯作者: Aki Masunaga

"Conservation of gene expression amidst genomic rearrangement in two species of Oikopleura dioica

“两种 Oikopleura dioica 物种基因组重排过程中基因表达的保守性

• 发表时间: 2023
• 作者: Masunaga A;Mansfield MJ;Tan Y;Liu AW;Bliznina A;Barzaghi P;Hodgetts TL;Ferrandez‐Roldan A;Canestro C;Onuma TA;Plessy C and Luscombe NM;Michael Mansfield
• 通讯作者: Michael Mansfield

Gene expression in the context of genomic rearrangement in Oikopleura dioica

Oikopleura dioica 基因组重排背景下的基因表达

• 发表时间: 2022
• 作者: Masunaga A;Mansfield MJ;Tan Y;Liu AW;Bliznina A;Barzaghi P;Hodgetts TL;Ferrandez‐Roldan A;Canestro C;Onuma TA;Plessy C and Luscombe NM;Michael Mansfield;Aki Masunaga;Charles Plessy;Michael Mansfield
• 通讯作者: Michael Mansfield