Iron-sulfur cluster biosynthesis : Molucular mechanism of the assembly of intermediate cluster and its transfer to apo proteins.
Iron-sulfur cluster biosynthesis : Molucular mechanism of the assembly of intermediate cluster and its transfer to apo proteins.
批准号:
17570112
负责人:
TAKAHASHI Yasuhiro
金额:
$2.24万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (C)
财政年份:
2005
资助国家:
日本
项目状态:
已结题
起止时间:
2005 至 2006
中文摘要
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英文摘要
Iron-sulfur (Fe-S) proteins are present in almost all living organisms and exhibit diverse functions, which include electron transport, redox and non-redox catalysis, and sensing for regulatory processes. They contain clusters of iron and sulfur atoms with variable complexity, such as [2Fe-2S], [3Fe-4S], and [4Fe-4S] clusters. We have recently found two independent systems, called ISC and SUF, essential for the biosynthesis of Fe-S clusters, although still very little is known about the mechanistic details. In this study we have focused on IcsU, a central key player of the ISC machinery working as a scaffold for a nascent Fe-S cluster, and undertaken genetic, biochemical and structural approaches to elucidate the complex mechanism by which the Fe-S clusters are assembled and transferred to target proteins.1. We have isolated and analyzed 14 psuedorevertants generated from a mutant strain lacking HscA and HscB of the ISC machinery, and found that the responsible suppressor mutations are all located in IscU. The mutated IscUs were conformationally altered from WT IscU at the secondary structure level, suggesting that, in wild-type cells, HscA and HscB induce the structural changes of IscU thereby facilitating the cluster transfer from IscU to target proteins.2. In contrast to the notoriously unstable Fe-S cluster intermediate in the scaffold proteins, we found that the IscU homolog from the hyperthermophilic bacterium Aquifex aeolicus (AaIscU) carries a stable Fe-S cluster. AaIscU was purified, characterized and crystallized for the first time under anaerobic conditions. The crystal structure has revealed that the holo-AaIscU is an asymmetric trimer carrying only one [2Fe-2S] cluster at the interface between two structurally altered protomers. The structure of the asymmetric trimer provides valuable insight into the molecular event: the assembly, maintenance and transfer of the nascent Fe-S cluster is tightly coupled to the conversion of the oligomeric state of IscU.
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Crystallization and preliminary x-ray crystallographic studies of the oxidative-stress sensor SoxR and its complex with DNA
氧化应激传感器 SoxR 及其与 DNA 复合物的结晶和初步 X 射线晶体学研究
DOI:
--
发表时间:
2006
期刊:
Acta Cryst. F62
影响因子:
--
作者:
[Otsuka, M., Otsuka M., Otsuka M, Takaki Nimura et al., Yoshinori Hagiwara, Shintaro Kitaoka, Akifumi Kamata et al., Yoshinori Hagiwara, Satoshi Watanabe]
通讯作者:
Satoshi Watanabe
DOI:
10.1016/j.febslet.2005.11.058
发表时间:
2006-01-09
期刊:
FEBS LETTERS
影响因子:
3.5
作者:
[Kitaoka, S, Wada, K, Takahashi, Y]
通讯作者:
Takahashi, Y
Structural study of ferredoxin-dependent bilin reductase.
铁氧还蛋白依赖性胆碱还原酶的结构研究。
DOI:
--
发表时间:
2006
期刊:
J.Cryst.Soc.Jpn 48-4
影响因子:
--
作者:
[K.Matsuoka, H.Tabunoki, T.Kawai, S.Ishikawa, M.Yamamoto, R.Sato, T.Ando, Satoshi Watanabe, Hiroshi Tokumitsu et al., 安藤 哲, Masakazu Sugishima]
通讯作者:
Masakazu Sugishima
フェレドキシン依存性ビリン還元酵素の構造研究
铁氧还蛋白依赖性胆碱还原酶的结构研究
DOI:
--
发表时间:
2006
期刊:
日本結晶学会誌 48
影响因子:
--
作者:
[T.Fujii, M.G Suzuki, T.Kawai, K.Tsuneizumi, A.Ohnishi, M.Kurihara, S.Matsumoto, T.Ando, 杉島正一]
通讯作者:
杉島正一
DOI:
10.1002/prot.20481
发表时间:
2005-08-15
期刊:
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
影响因子:
2.9
作者:
[Shimomura, Y, Takahashi, Y, Fukuyama, K]
通讯作者:
Fukuyama, K
共 10 条
Elucidation of molecular mechanism of the SufBCD complex responsible for biosynthesis of iron-sulfur cluster and development of its inhibitor
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批准号:15H04472
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依托单位:
Molecular mechanism of the supramolecular machinery involved in biosynthesis of labile iron-sulfur clusters
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批准号:24570148
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财政年份:2012
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A comparative study of the English colonies between Virginia and New England
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财政年份:2009
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负责人:TAKAHASHI Yasuhiro
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依托单位:
Molecular analysis of iron -sulfur cluster biosynthesis machinery : Reaction mechanism based on conformational transition of IscU
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批准号:20570130
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$3.16万
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财政年份:2008
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依托单位:
Mechanism of iron-sulfur cluster biosynthesis : Analysis of a framework and the reaction mechanism for the two iron-sulfur cluster assembly systems.
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批准号:15510174
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$2.18万
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财政年份:2003
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依托单位:
Mechanism of iron-sulfur cluster assembly : Structure and functional interaction of Isc proteins
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批准号:13680690
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Molecular Biochemical Study on the Cyanobacterial ndh (NADH dehydrogenase) Gene Products
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财政年份:1994
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负责人:TAKAHASHI Yasuhiro
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依托单位:
Structure and Disorder of Fibrous Substance including Silk and Cellulose
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批准号:62470096
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项目类别:Grant-in-Aid for General Scientific Research (B)
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负责人:TAKAHASHI Yasuhiro
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依托单位:
海外基金