Idaho INBRE Bioinformatics Core
爱达荷州 INBRE 生物信息学核心
基本信息
- 批准号:10152606
- 负责人:
- 金额:$ 14.05万
- 依托单位:
- 依托单位国家:美国
- 项目类别:
- 财政年份:2001
- 资助国家:美国
- 起止时间:2001-09-30 至 2024-04-30
- 项目状态:已结题
- 来源:
- 关键词:AddressAreaAssessment toolBindingBioinformaticsBiomedical ResearchBiometryCenters of Research ExcellenceCollaborationsComputational BiologyConsultCore FacilityDNA sequencingDataData Storage and RetrievalDegree programDevelopmentDoctor of PhilosophyEducationEducational CurriculumEducational workshopEnvironmentFacultyFlow CytometryFundingGenomicsGrantIdahoImageImage CytometryInfrastructureInstitutesInstitutionInterdisciplinary StudyKnowledgeLaboratoriesLearningLife Cycle StagesLocationMentorsMolecularMontanaNew MexicoPilot ProjectsPositioning AttributeProteinsProteomicsResearchResearch PersonnelResearch Project GrantsResourcesRoleRunningScienceSecureServicesSignal TransductionSiteStreamStudentsTechnologyTimeTrainingTraining and EducationUnited States National Institutes of HealthUniversitiesbioinformatics resourcebioinformatics toolcareer developmentcollegecommunity collegecomputing resourcescyber infrastructuredata managementeducation researcheducation resourcesequipment acquisitionexperiencefaculty mentorgraduate studentinnovationlaboratory experimentlecturesmembermetabolomicsonline resourceoperationoptical imagingprogramsrepositoryskillsstudent trainingtooltranscriptome sequencingundergraduate research experienceundergraduate studentweb site
项目摘要
Project Summary/Abstract Bioinformatics Core Component
The Idaho INBRE-4 Bioinformatics Core will integrate cyberinfrastructure tools and resources,
bioinformatics/biostatistical consulting, and bioinformatics training. The Core will support computationally-
intensive research under the broad Cell Signaling scientific theme. Facilities are physically located at the UI,
ISU, and BSU and open to the INBRE Network. At the UI, IBEST includes a Computational Resources Core, a
Genomics Resources Core, and an Optical Imaging Core. At ISU, the Molecular Research Core Facility
includes DNA and RNA sequencing, advanced imaging, and flow cytometry. At BSU, the Biomolecular
Research Center includes proteomics and metabolomics, protein-protein molecular interactions, and imaging.
KA Cornell is the current Bioinformatics Core Director (INBRE-3) and will continue in this role during INBRE-4.
He is well qualified with strong administrative experience and an active research program that has been funded
by NIH, NSF, USDA, and DOD. A Bioinformatics Committee with representatives from all INBRE partner
institutions will guide Core use and educational resources. Members have expertise in bioinformatics,
bioinformatics education, or experience in Core facility operations. Previous progress was significant, and
highlights include (i) INBRE-initiated Cores are now university sustained, (ii) increased Core users to >1,700,
(iii) integrated bioinformatics in science curricula at all INBRE institutions (35 courses), (iv) MS/PhD programs
in Bioinformatics and Computational Biology at the UI, and (v) a new BA/BS degree in Bioinformatics at Lewis-
Clark State College (a PUI). This new BA/BS major was INBRE-supported through faculty/student research,
new faculty hires, new equipment purchases, and Network collaborations with research-intensive universities.
Plans to familiarize researchers and students with bioinformatics tools and resources include competitive
Technology Access Grants (TAGs) for scientifically meritorious projects and workshops/seminars in the INBRE
Student Program. Bioinformatics will continue to be integrated into curricula and research. INBRE institutions
will continue to use local and remote bioinformatics servers for hands-on undergraduate/graduate student
education. The Core will partner with the Northwest Knowledge Network for high bandwidth networking and
secure data storage. A dedicated section of the Idaho INBRE website, the Bioinformatics Educational
Repository, organizes lectures, laboratory exercises, assessment tools, and supplementary materials for
faculty and student use. An innovation of the Bioinformatics Core is to share established programs and
infrastructure through a tri-state Regional Alliance of INBRE Networks (RAIN) with Montana and New Mexico
INBREs. This collaboration will reduce redundancy, increase interdisciplinary Core use and research
collaborations among faculty, and broaden bioinformatics research and education opportunities for students.
Pooled resources include (i) bioinformatics degree programs in Idaho, (ii) biostatistics and metabolomics in the
Montana INBRE, and (iii) leading-edge sequencing and bioinformatics training by the New Mexico INBRE.
项目概要/摘要生物信息学核心组件
爱达荷州INBRE-4生物信息学核心将整合网络基础设施工具和资源,
生物信息学/生物统计咨询和生物信息学培训。核心将支持计算-
在广泛的细胞信号传导科学主题下进行深入研究。设施实际上位于UI,
ISU和BSU并向INBRE网络开放。在UI中,IBEST包括计算资源核心、
基因组学资源核心和光学成像核心。在ISU,分子研究核心设施
包括DNA和RNA测序、高级成像和流式细胞术。在BSU,生物分子
研究中心包括蛋白质组学和代谢组学,蛋白质-蛋白质分子相互作用和成像。
KA Cornell是目前的生物信息学核心总监(INBRE-3),并将在INBRE-4期间继续担任这一职务。
他是很好的资格与强大的行政经验和积极的研究计划,已资助
美国国家卫生研究院,国家科学基金会,美国农业部和国防部。由INBRE所有合作伙伴代表组成的生物信息学委员会
机构将指导核心使用和教育资源。成员具有生物信息学方面的专业知识,
生物信息学教育或核心设施运营经验。以前的进展是显著的,
重点包括:(一)由国家基础设施研究所发起的核心项目现在由大学维持,(二)核心项目用户增加到1,700多个,
(iii)将生物信息学纳入国家生物伦理研究所所有机构的科学课程(35门课程),㈣硕士/博士课程
在UI的生物信息学和计算生物学,以及(v)在刘易斯的生物信息学新的BA/BS学位-
克拉克州立学院(PUI)。这个新的BA/BS专业是INBRE-supported通过教师/学生的研究,
新的教师招聘,新的设备购买,以及与研究密集型大学的网络合作。
计划使研究人员和学生熟悉生物信息学工具和资源,包括竞争性的
为INBRE的有科学价值的项目和讲习班/研讨会提供技术获取赠款
学生计划。生物信息学将继续纳入课程和研究。INBRE机构
我将继续使用本地和远程生物信息学服务器为动手本科生/研究生
教育核心将与西北知识网络合作,进行高带宽网络建设,
安全数据存储。爱达荷州INBRE网站的一个专门部分,生物信息学教育
存储库,组织讲座,实验室练习,评估工具和补充材料,
教师和学生使用。生物信息学核心的一个创新是共享已建立的程序,
通过与蒙大拿州和新墨西哥州的INBRE网络(RAIN)三州区域联盟提供基础设施
INBREs。这种合作将减少冗余,增加跨学科的核心使用和研究
教师之间的合作,并扩大生物信息学研究和学生的教育机会。
汇集的资源包括(i)爱达荷州的生物信息学学位课程,(ii)
蒙大拿州INBRE,和(iii)领先的测序和生物信息学培训的新墨西哥州INBRE。
项目成果
期刊论文数量(0)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
数据更新时间:{{ journalArticles.updateTime }}
{{
item.title }}
{{ item.translation_title }}
- DOI:
{{ item.doi }} - 发表时间:
{{ item.publish_year }} - 期刊:
- 影响因子:{{ item.factor }}
- 作者:
{{ item.authors }} - 通讯作者:
{{ item.author }}
数据更新时间:{{ journalArticles.updateTime }}
{{ item.title }}
- 作者:
{{ item.author }}
数据更新时间:{{ monograph.updateTime }}
{{ item.title }}
- 作者:
{{ item.author }}
数据更新时间:{{ sciAawards.updateTime }}
{{ item.title }}
- 作者:
{{ item.author }}
数据更新时间:{{ conferencePapers.updateTime }}
{{ item.title }}
- 作者:
{{ item.author }}
数据更新时间:{{ patent.updateTime }}
Kenneth A Cornell其他文献
Kenneth A Cornell的其他文献
{{
item.title }}
{{ item.translation_title }}
- DOI:
{{ item.doi }} - 发表时间:
{{ item.publish_year }} - 期刊:
- 影响因子:{{ item.factor }}
- 作者:
{{ item.authors }} - 通讯作者:
{{ item.author }}
{{ truncateString('Kenneth A Cornell', 18)}}的其他基金
GLOBAL CONSEQUENCES OF INTERRUPTION OF MICROBIAL AUTOINDUCER SIGNALING
微生物自诱导剂信号传导中断的全球后果
- 批准号:
8359682 - 财政年份:2011
- 资助金额:
$ 14.05万 - 项目类别:
GLOBAL CONSEQUENCES OF INTERRUPTION OF MICROBIAL AUTOINDUCER SIGNALING
微生物自诱导剂信号传导中断的全球后果
- 批准号:
8167436 - 财政年份:2010
- 资助金额:
$ 14.05万 - 项目类别:
PLASMID DNA TO INDUCE IMMUNITY TO INTRACELLULAR PATHOGEN
质粒 DNA 诱导细胞内病原体免疫
- 批准号:
2867926 - 财政年份:1997
- 资助金额:
$ 14.05万 - 项目类别:
PLASMID DNA TO INDUCE IMMUNITY TO INTRACELLULAR PATHOGEN
质粒 DNA 诱导细胞内病原体免疫
- 批准号:
6169786 - 财政年份:1997
- 资助金额:
$ 14.05万 - 项目类别:
相似国自然基金
层出镰刀菌氮代谢调控因子AreA 介导伏马菌素 FB1 生物合成的作用机理
- 批准号:2021JJ40433
- 批准年份:2021
- 资助金额:0.0 万元
- 项目类别:省市级项目
寄主诱导梢腐病菌AreA和CYP51基因沉默增强甘蔗抗病性机制解析
- 批准号:32001603
- 批准年份:2020
- 资助金额:24.0 万元
- 项目类别:青年科学基金项目
AREA国际经济模型的移植.改进和应用
- 批准号:18870435
- 批准年份:1988
- 资助金额:2.0 万元
- 项目类别:面上项目
相似海外基金
Onboarding Rural Area Mathematics and Physical Science Scholars
农村地区数学和物理科学学者的入职
- 批准号:
2322614 - 财政年份:2024
- 资助金额:
$ 14.05万 - 项目类别:
Standard Grant
TRACK-UK: Synthesized Census and Small Area Statistics for Transport and Energy
TRACK-UK:交通和能源综合人口普查和小区域统计
- 批准号:
ES/Z50290X/1 - 财政年份:2024
- 资助金额:
$ 14.05万 - 项目类别:
Research Grant
Wide-area low-cost sustainable ocean temperature and velocity structure extraction using distributed fibre optic sensing within legacy seafloor cables
使用传统海底电缆中的分布式光纤传感进行广域低成本可持续海洋温度和速度结构提取
- 批准号:
NE/Y003365/1 - 财政年份:2024
- 资助金额:
$ 14.05万 - 项目类别:
Research Grant
Point-scanning confocal with area detector
点扫描共焦与区域检测器
- 批准号:
534092360 - 财政年份:2024
- 资助金额:
$ 14.05万 - 项目类别:
Major Research Instrumentation
Collaborative Research: Scalable Manufacturing of Large-Area Thin Films of Metal-Organic Frameworks for Separations Applications
合作研究:用于分离应用的大面积金属有机框架薄膜的可扩展制造
- 批准号:
2326714 - 财政年份:2024
- 资助金额:
$ 14.05万 - 项目类别:
Standard Grant
Collaborative Research: Scalable Manufacturing of Large-Area Thin Films of Metal-Organic Frameworks for Separations Applications
合作研究:用于分离应用的大面积金属有机框架薄膜的可扩展制造
- 批准号:
2326713 - 财政年份:2024
- 资助金额:
$ 14.05万 - 项目类别:
Standard Grant
Unlicensed Low-Power Wide Area Networks for Location-based Services
用于基于位置的服务的免许可低功耗广域网
- 批准号:
24K20765 - 财政年份:2024
- 资助金额:
$ 14.05万 - 项目类别:
Grant-in-Aid for Early-Career Scientists
RAPID: Collaborative Research: Multifaceted Data Collection on the Aftermath of the March 26, 2024 Francis Scott Key Bridge Collapse in the DC-Maryland-Virginia Area
RAPID:协作研究:2024 年 3 月 26 日 DC-马里兰-弗吉尼亚地区 Francis Scott Key 大桥倒塌事故后果的多方面数据收集
- 批准号:
2427233 - 财政年份:2024
- 资助金额:
$ 14.05万 - 项目类别:
Standard Grant
RAPID: Collaborative Research: Multifaceted Data Collection on the Aftermath of the March 26, 2024 Francis Scott Key Bridge Collapse in the DC-Maryland-Virginia Area
RAPID:协作研究:2024 年 3 月 26 日 DC-马里兰-弗吉尼亚地区 Francis Scott Key 大桥倒塌事故后果的多方面数据收集
- 批准号:
2427232 - 财政年份:2024
- 资助金额:
$ 14.05万 - 项目类别:
Standard Grant
RAPID: Collaborative Research: Multifaceted Data Collection on the Aftermath of the March 26, 2024 Francis Scott Key Bridge Collapse in the DC-Maryland-Virginia Area
RAPID:协作研究:2024 年 3 月 26 日 DC-马里兰-弗吉尼亚地区 Francis Scott Key 大桥倒塌事故后果的多方面数据收集
- 批准号:
2427231 - 财政年份:2024
- 资助金额:
$ 14.05万 - 项目类别:
Standard Grant