Cloud-Based Biomedical Data Storage and Analysis: Implications for Trustworthy Governance
Cloud-Based Biomedical Data Storage and Analysis: Implications for Trustworthy Governance
批准号:
10320454
负责人:
Stephanie Malia Fullerton
金额:
$19.44万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
已结题
起止时间:
2020-12-18 至 2024-11-30
关键词:
All of Us Research ProgramBiomedical ResearchClinicalClinical DataCollaborationsCommunitiesCost utilityDataData AnalysesData Storage and RetrievalData StoreDecision MakingDevelopmentEnsureEquilibriumFeedbackGenomic Data CommonsGenomic medicineGenomicsGoalsHealthHumanIndividualInformaticsInformed ConsentInterviewInvestigationLinkLogisticsNational Heart, Lung, and Blood InstituteNational Human Genome Research InstituteOutcomeParticipantPhenotypePoliciesPolicy AnalysisProceduresRecommendationResearchResearch PersonnelRoleSamplingStructureTimeTrans-Omics for Precision MedicineVisualizationbasecatalystcloud basedcomputerized data processingdata accessdata sharingdatabase of Genotypes and Phenotypesdesigngenomics cloudinformantinterestnovelnovel strategiesphenotypic dataprecision medicinepublic trusttooltranslational genomicstrustworthiness
中文摘要
项目总结
英文摘要
PROJECT SUMMARY
The storage, sharing, and analysis of individual-level genomic, environmental, and linked phenotypic and/or
health outcome data poses profound technical and logistical challenges for precision medicine research.
Accordingly, new cloud-based computing and storage platforms are being developed to support facile data
processing and cloud-based analysis commons. However, the implications for responsible data governance of
these mechanisms are currently unexamined. To promote responsible and trustworthy data governance (i.e.
decision-making about how biomedical data are stored, accessed, and used by researchers, as well as
communicated to research participants), we will conduct an in-depth qualitative analysis of the policies,
practices, and procedures associated with three emerging cloud-based precision medicine platforms: the
BioData Catalyst or BDCatalyst (NHLBI), the Analysis, Visualization, and Informatics Lab-space or AnVIL
(NHGRI), and the Research Hub (All of Us Research Program). The immediate goal of this exploratory
investigation will be to examine how the control and management of genomic and linked clinical data stored on
these platforms differs from earlier data sharing efforts. We will also explore what research stakeholders,
including platform developers; investigators (data contributors as well as data users); institutional officials; and
funders regard as the most relevant governance tradeoffs associated with the new approaches. In particular,
we will solicit views on mechanisms employed to protect participant data, ensure that research uses are
aligned with informed consent, and make well-validated results available to interested participants. Draft
recommendations based in these observations will be shared with the research community and form the basis
for subsequent research, which will introduce these new platforms and the research practices they enable to
diverse research participants for feedback and critical reflection. To achieve these research objectives, we will
pursue the following Aims: (1) Characterize current approaches to the storage, sharing, and analysis of
largescale genomic and linked data enabled by emerging cloud-based analysis platforms; (2) Explore
stakeholder views on current and proposed approaches to the governance of genomic cloud-based analysis
platforms; and (3) Propose and vet recommendations for the trustworthy governance of genomic and linked
environmental and phenotypic data in the context of cloud-based platforms. The proposed investigation will
generate novel, timely, and detailed information about the storage, access, and intended use of large-scale
genomic and linked clinical data held in emerging cloud-based data storage and analysis platforms. These
data will provide a robust basis from which to identify best practices for trustworthy data governance and
provide enhanced transparency about a key precision medicine research tool.
期刊论文(1)
专著(0)
科研奖励(0)
会议论文
DOI:
10.1016/j.xhgg.2023.100196
发表时间:
2023-07-13
期刊:
HUMAN GENETICS AND GENOMICS ADVANCES
影响因子:
--
作者:
[Dahlquist, Jacklyn M., Nelson, Sarah C., Fullerton, Stephanie M.]
通讯作者:
Fullerton, Stephanie M.
Evolving Our Partnership: The CSER2 Centralized Support Coordinating Center
-
批准号:10360348
-
项目类别:
-
资助金额:$92.52万
-
财政年份:2021
-
负责人:Stephanie Malia Fullerton
-
依托单位:
Patient Safety in Genome Medicine: Learning from the Past to Safeguard the Future
-
批准号:8621406
-
项目类别:
-
资助金额:$19.31万
-
财政年份:2014
-
负责人:Stephanie Malia Fullerton
-
依托单位:
Evolving Our Partnership: The CSER2 Centralized Support Coordinating Center
-
批准号:9907352
-
项目类别:
-
资助金额:$44.59万
-
财政年份:2013
-
负责人:Stephanie Malia Fullerton
-
依托单位:
Genes, the Environment, and ME (GEM)
-
批准号:8248696
-
项目类别:
-
资助金额:$25.96万
-
财政年份:2011
-
负责人:Stephanie Malia Fullerton
-
依托单位:
Genes, the Environment, and ME (GEM)
-
批准号:8478224
-
项目类别:
-
资助金额:$24.59万
-
财政年份:2011
-
负责人:Stephanie Malia Fullerton
-
依托单位:
Genes, the Environment, and ME (GEM)
-
批准号:8651964
-
项目类别:
-
资助金额:$24.78万
-
财政年份:2011
-
负责人:Stephanie Malia Fullerton
-
依托单位:
ETHICS AND POLICY
-
批准号:7881274
-
项目类别:
-
资助金额:$7.95万
-
财政年份:2010
-
负责人:Stephanie Malia Fullerton
-
依托单位:
Development Research Projects
-
批准号:7639090
-
项目类别:
-
资助金额:$46.72万
-
财政年份:2008
-
负责人:Stephanie Malia Fullerton
-
依托单位:
Doctoral Dissertation Research: What are our AIMs? Race, Genetics, and the Practice of Ancestry Informative Markers
-
批准号:0822410
-
项目类别:Standard Grant
-
资助金额:$0.8万
-
财政年份:2008
-
负责人:Stephanie Malia Fullerton
-
依托单位:
ETHICS AND POLICY
-
批准号:8376399
-
项目类别:
-
资助金额:$7.69万
-
财政年份:--
-
负责人:Stephanie Malia Fullerton
-
依托单位:
ETHICS AND POLICY
-
批准号:8725073
-
项目类别:
-
资助金额:$7.42万
-
财政年份:--
-
负责人:Stephanie Malia Fullerton
-
依托单位:
ETHICS AND POLICY
-
批准号:8296076
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项目类别:
-
资助金额:$8.0万
-
财政年份:--
-
负责人:Stephanie Malia Fullerton
-
依托单位:
ETHICS AND POLICY
-
批准号:8495089
-
项目类别:
-
资助金额:$7.14万
-
财政年份:--
-
负责人:Stephanie Malia Fullerton
-
依托单位:
海外基金