The Diversity Outbred Diabetes Project
The Diversity Outbred Diabetes Project
批准号:
10376191
负责人:
Alan D Attie
金额:
$57.15万
依托单位国家:
美国
项目类别:
财政年份:
2014
资助国家:
美国
项目状态:
已结题
起止时间:
2014-04-01 至 2023-03-31
关键词:
ATAC-seqAffectAnimal ModelB-Cell DevelopmentBeta CellCandidate Disease GeneCell physiologyCellular biologyCollaborationsCommunitiesCyclic AMP-Dependent Protein KinasesDataData SetDevelopmentDiabetes MellitusDietEmbryoEpidemicGene DeletionGenerationsGenesGeneticGenetic ScreeningGenetic TranscriptionGenetic VariationGenetic studyGlucagonHumanHuman GeneticsInbred Strains MiceInsulinInsulin ResistanceIslets of LangerhansKnock-outKnockout MiceLaboratoriesLeadLightLinkMeiotic RecombinationMolecularMouse StrainsMusNon-Insulin-Dependent Diabetes MellitusNutrientObesityObesity EpidemicPathway interactionsPhenotypePhysiologicalPlayPopulationPopulation GeneticsPredispositionProductionQuantitative Trait LociResearchResearch DesignResolutionRiskRoleSignal TransductionSingle Nucleotide PolymorphismStimulusStructure of beta Cell of isletTestingThe Jackson LaboratoryTimeVariantVesicleViralWorkbioinformatics pipelinecell typedetection of nutrientdiabetes riskgene discoverygene functiongenetic resourcegenome wide association studygenomic locushuman embryonic stem cellinsightinsulin regulationinsulin secretionisletmolecular phenotypemouse geneticsnovelnovel therapeutic interventionpatient stratificationresponsetraffickingtranscription factortranscriptomicsweb site
中文摘要
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英文摘要
PROJECT SUMMARY/ABSTRACT
Type 2 diabetes (T2D) is the result of an increased demand for insulin along with an inability of pancreatic β-
cells to meet this demand by secreting sufficient amounts of insulin. The majority of gene loci identified by human
genetic studies of T2D affect β-cell development, mass, and/or function. Yet, there is a great deal that is unknown
about how β-cells secrete insulin in response to nutrient stimuli. We carried out a genetic screen of insulin
secretion in 233,447 pancreatic islets ex vivo that were isolated from 483 Diversity Outbred (DO) mice. The DO
mice were derived from 8 inbred mouse strains representing ~80% of the genetic diversity of all mouse strains.
They have as much genetic diversity as the entire human population; ~40 million single nucleotide
polymorphisms. The DO mice have been maintained for >30 generations, accumulating enough meiotic
recombinations to enable high-resolution mapping of pathophysiological phenotypes. Our genetic screen
identified 30 gene loci that affect insulin secretion or content of insulin or glucagon. Using our pipeline for gene
identification, we chose two genes for further study, Hunk and Zfp148. We derived a whole-body knockout of
Hunk and a β-cell-specific knockout of Zfp148. Islets from both of these knockout mice secreted more insulin in
response to nutrient stimulation than control mice. Hunk is a protein kinase, thus we will identify the substrates
of Hunk to discover how it regulates insulin secretion. Zfp148 is a transcription factor. Thus, we will identify the
direct transcriptional targets of Zfp148. We will apply our bioinformatic pipeline to identify additional genes from
the 30 gene loci identified in our screen and provide them to the research community. Functional studies will be
performed in genetically edited mice, genetically edited human ES-derived β-cells, and human islets. These
studies will discover novel genes and pathways involved in β-cell function and T2D susceptibility.
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DOI:
10.1097/med.0000000000000321
发表时间:
2017-04
期刊:
Current opinion in endocrinology, diabetes, and obesity
影响因子:
--
作者:
[Attie AD, Churchill GA, Nadeau JH]
通讯作者:
Nadeau JH
DOI:
10.1016/j.jlr.2022.100243
发表时间:
2022-08
期刊:
JOURNAL OF LIPID RESEARCH
影响因子:
6.5
作者:
[Mitok, Kelly A., Keller, Mark P., Attie, Alan D.]
通讯作者:
Attie, Alan D.
DOI:
10.1016/j.ejmech.2020.112678
发表时间:
2020-11-15
期刊:
European journal of medicinal chemistry
影响因子:
6.7
作者:
[Xie H, Yang K, Winston-McPherson GN, Stapleton DS, Keller MP, Attie AD, Smith KA, Tang W]
通讯作者:
Tang W
DOI:
10.1172/jci144904
发表时间:
2022-03-01
期刊:
The Journal of clinical investigation
影响因子:
--
作者:
[Andersen RC, Schmidt JH, Rombach J, Lycas MD, Christensen NR, Lund VK, Stapleton DS, Pedersen SS, Olsen MA, Stoklund M, Noes-Holt G, Nielsen TT, Keller MP, Jansen AM, Herlo R, Pietropaolo M, Simonsen JB, Kjærulff O, Holst B, Attie AD, Gether U, Madsen KL]
通讯作者:
Madsen KL
DOI:
10.1038/s41374-021-00592-8
发表时间:
2021-07
期刊:
LABORATORY INVESTIGATION
影响因子:
5
作者:
[Attie, Alan D, Schueler, Kathryn M, Keller, Mark P, Mitok, Kelly A, Simonett, Shane P, Hudkins, Kelly L, Mehrotra, Kunaal, Graham, Mark J, Lee, Richard G, Alpers, Charles E]
通讯作者:
Alpers, Charles E
共 6 条
Mapping heritable chromatin loop variants with allele-specific Hi-C analysis
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批准号:10583721
-
项目类别:
-
资助金额:$68.75万
-
财政年份:2023
-
负责人:Alan D Attie
-
依托单位:
Diabetes Data and Hypothesis Hub (D2H2)
-
批准号:10655363
-
项目类别:
-
资助金额:$106.34万
-
财政年份:2022
-
负责人:Alan D Attie
-
依托单位:
Diabetes Data and Hypothesis Hub (D2H2)
-
批准号:10414588
-
项目类别:
-
资助金额:$108.07万
-
财政年份:2022
-
负责人:Alan D Attie
-
依托单位:
2020 Protein Procession, Trafficking and Secretion GRC/GRS
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批准号:9978451
-
项目类别:
-
资助金额:$1.1万
-
财政年份:2020
-
负责人:Alan D Attie
-
依托单位:
Genetic Control of Metabolic Flux in Response to Diet
-
批准号:10264826
-
项目类别:
-
资助金额:$150.0万
-
财政年份:2020
-
负责人:Alan D Attie
-
依托单位:
Genetic Control of Metabolic Flux in Response to Diet
-
批准号:10440491
-
项目类别:
-
资助金额:$150.0万
-
财政年份:2020
-
负责人:Alan D Attie
-
依托单位:
Genetic Control of Metabolic Flux in Response to Diet
-
批准号:10649513
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项目类别:
-
资助金额:$150.0万
-
财政年份:2020
-
负责人:Alan D Attie
-
依托单位:
The Role of Sorcs1 and Sortilin in Diabetes Susceptibility
-
批准号:9110991
-
项目类别:
-
资助金额:$34.43万
-
财政年份:2015
-
负责人:Alan D Attie
-
依托单位:
The Role of Sorcs1 and Sortilin in Diabetes Susceptibility
-
批准号:9322473
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项目类别:
-
资助金额:$34.43万
-
财政年份:2015
-
负责人:Alan D Attie
-
依托单位:
The Role of Sorcs1 and Sortilin in Diabetes Susceptibility
-
批准号:8960780
-
项目类别:
-
资助金额:$34.43万
-
财政年份:2015
-
负责人:Alan D Attie
-
依托单位:
The Diversity Outbred Diabetes Project
-
批准号:9763205
-
项目类别:
-
资助金额:$60.5万
-
财政年份:2014
-
负责人:Alan D Attie
-
依托单位:
The Collaborative Cross Project of Diabetes
-
批准号:8823773
-
项目类别:
-
资助金额:$42.04万
-
财政年份:2014
-
负责人:Alan D Attie
-
依托单位:
The Diversity Outbred Diabetes Project
-
批准号:9902411
-
项目类别:
-
资助金额:$58.26万
-
财政年份:2014
-
负责人:Alan D Attie
-
依托单位:
The Collaborative Cross Project of Diabetes
-
批准号:8671747
-
项目类别:
-
资助金额:$43.3万
-
财政年份:2014
-
负责人:Alan D Attie
-
依托单位:
The Collaborative Cross Project of Diabetes
-
批准号:8993522
-
项目类别:
-
资助金额:$3.24万
-
财政年份:2014
-
负责人:Alan D Attie
-
依托单位:
The Collaborative Cross Project on Obesity and Diabetes
-
批准号:8077061
-
项目类别:
-
资助金额:$51.72万
-
财政年份:2011
-
负责人:Alan D Attie
-
依托单位:
EARLY DETECTION AND PROGRESSION OF OBESITY AND DIABETES
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批准号:8168981
-
项目类别:
-
资助金额:$0.06万
-
财政年份:2010
-
负责人:Alan D Attie
-
依托单位:
PROGRESSION OF INFLAMMATION IN OBESITY AND INSULIN RESISTANT MOUSE MODEL
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批准号:8169010
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项目类别:
-
资助金额:$0.06万
-
财政年份:2010
-
负责人:Alan D Attie
-
依托单位:
Genetic Mapping / Beta-cell Decomposition in Type 2 Diabetes
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批准号:7992510
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项目类别:
-
资助金额:$5.8万
-
财政年份:2010
-
负责人:Alan D Attie
-
依托单位:
Genetic Mapping / Beta-cell Decomposition in Type 2 Diabetes
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批准号:7325804
-
项目类别:
-
资助金额:$62.47万
-
财政年份:2003
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负责人:Alan D Attie
-
依托单位:
海外基金