Whole genome sequencing based tracking of pathogens in Animal Diagnostic Specimens

基于全基因组测序的动物诊断样本病原体追踪

• 批准号: 10468662
• 负责人: Laura Ruesch
• 金额: $ 7.11万
• 依托单位: SOUTH DAKOTA STATE UNIVERSITY
• 依托单位国家: 美国
• 财政年份: 2018
• 资助国家: 美国
• 起止时间: 2018-09-10 至 2023-08-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/10468662
• 关键词: Whole; genome; sequencing; based; tracking

Abstract The goal of this proposal is to enable the Animal Disease Research Laboratory(ADRDL), South Dakota to serve as a whole genome sequencing laboratory for CVM Vet-LIRN Veterinary Diagnostic Laboratory Program. ADRDL is one of the nationally preeminent full service, animal disease research and diagnostic laboratories that provides the fastest, most accurate, and most dependable animal disease diagnostic services possible. ADRDL is a not-for-profit lab and provides state-of-the-art diagnostic services and instrumentation for the detection of zoonotic and animal diseases and conducts over 500, 000 diagnostic tests every year. In this project, ADRDL will receive isolates from other source labs in Vet-LIRN network, sequence genomes of those isolates, perform bioinformatics analysis of the data and submit the raw data and results to Vet-LIRN program office and NCBI sequence read archive.

摘要 该提案的目标是使动物疾病研究实验室（ADRDL）， 南达科他州将成为CVM Vet-LIRN的全基因组测序实验室 兽医诊断实验室计划。ADRDL是全国最优秀的 提供全方位服务的动物疾病研究和诊断实验室， 最准确、最可靠的动物疾病诊断服务。 ADRDL是一个非营利实验室，提供最先进的诊断服务， 检测动物传染病和动物疾病的仪器，并进行了500多， 000次诊断测试。在本项目中，ADRDL将接收来自其他 Vet-LIRN网络中的源实验室，对这些分离株的基因组进行测序， 对数据进行生物信息学分析，并将原始数据和结果提交给Vet-LIRN 程序办公室和NCBI序列读取存档。