Secondary use of EMRs for surgical complication surveillance
Secondary use of EMRs for surgical complication surveillance
批准号:
10471838
负责人:
HONGFANG LIU
金额:
$64.37万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2015
资助国家:
美国
项目状态:
已结题
起止时间:
2015-05-01 至 2024-05-31
关键词:
AccountingAdoptionAdverse eventAreaBlood VesselsBreastClinicClinicalClinical DataClinical ResearchColorectal SurgeryComplexComplicationComputerized Medical RecordDataData ScienceDecision MakingDevelopmentElectronic Health RecordEvaluationEventFeedbackFundingGlareGoldHealth Care CostsHospitalsImageInformaticsInstitutionInterventionLeadLightMedicareModelingMonitorNatureOperative Surgical ProceduresOrganOutcomePancreasPatient CarePatient MonitoringPatientsPerformancePredictive ValueReportingResearchResearch ProposalsRiskStatistical ModelsSurgical SpecialtiesSurgical Wound InfectionSurgical complicationTextTimeTrainingTranslatingUncertaintyadverse outcomeclinical implementationclinical practiceclinical riskcostdata qualityexperiencegenetic informationhealth care qualityhigh dimensionalityhospital readmissionimprovedindexingmachine learning modelmedical specialtiesmicrobiomenext generationnovelpaymentpredictive modelingrapid growthrisk prediction modeltertiary caretransfer learningunstructured data
中文摘要
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英文摘要
Project Summary
Post-surgical complications (PSCs) have been an increasing concern for hospitals, particularly in light of
payment reform focusing on longer episodes and Medicare penalties for 30-day readmissions and adverse
outcomes including deep or organ space surgical site infections (DOS-SSIs). Readmission due to post-
discharge complications in particular has become a target for quality improvement since many of these events
are considered preventable. The wide adoption of electronic health records (EHRs) has led to a number of
clinical risk models for PSCs. These modeling efforts have primarily been targeted at the surgical specialty
areas within which a large number of events occur (such as colorectal surgery) as well as applying
sophisticated statistical modeling / machine learning to allow for missing data, interactions, and nonlinearities.
However, there is still considerable room for improvement both in terms of accuracy and generalizability. In our
current funding period, we have demonstrated the predictive value of clinical notes for PSCs. However, one
glaring limitation of current models is that they are trained on high volume surgical specialties at large tertiary
care institutions with high quality clinical data and use of advanced informatics approaches. The impetus of this
proposal is essentially two-fold: (i) Accurate models can be created for lower volume institutions and
specialties via transfer learning and leveraging more data via unconfirmed outcomes (i.e., those that mimic
gold standard outcomes, but are less reliable) with proper accounting of reliability. (ii) Decision making can be
significantly improved by leveraging time varying, real-time data such as labs, vitals, and clinical notes to
provide the current risk of PSCs for patients using all information as it becomes available. We aim to i) develop
and apply longitudinal risk models for PSCs to explicitly account for the time varying nature of some of the
information (e.g., labs, vitals, clinical notes) as it becomes available in real-time so that it can be integrated into
the clinician’s decision making; ii) develop and apply transfer learning to PSC risk models; iii) develop modeling
approaches that allow for the use of more widely available unconfirmed outcomes, while explicitly accounting
for the additional uncertainty and bias due to the use of such unconfirmed outcomes when compared to a less
available gold standard; and iv) develop a widely applicable framework for model evaluation and monitoring.
Models will often not perform in practice as they do in research for a variety of reasons. This framework will
allow us to identify these issues and more efficiently translate and apply these complex predictive models into
practice so that the research can have an immediate clinical impact. Successful development would open the
door for next generation patient monitoring, alerts, and interventions for all surgical specialties and all
institutions. We will make the relevant modeling results publicly available so that lower volume institutions can
leverage the transfer learning approach developed here without the need for our actual data. This will
ultimately lead to improved patient care and lower overall cost by identifying complications early and limiting
readmission due to PSCs at Mayo Clinic and other institutions across the nation.
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DOI:
10.4236/iim.2016.83006
发表时间:
2016-05
期刊:
Intelligent information management
影响因子:
--
作者:
[Shen F, Liu H, Sohn S, Larson DW, Lee Y]
通讯作者:
Lee Y
Leveraging Terminology Services for Extract-Transform-Load Processes: A User-Centered Approach.
利用术语服务进行提取-转换-加载过程:以用户为中心的方法。
DOI:
--
发表时间:
2016
期刊:
AMIA ... Annual Symposium proceedings. AMIA Symposium
影响因子:
--
作者:
[Peterson,KevinJ, Jiang,Guoqian, Brue,ScottM, Liu,Hongfang]
通讯作者:
Liu,Hongfang
Real-time risk prediction of colorectal surgery-related post-surgical complications using GRU-D model.
使用 GRU-D 模型实时预测结直肠手术相关术后并发症的风险。
DOI:
10.1016/j.jbi.2022.104202
发表时间:
2022
期刊:
Journal of biomedical informatics
影响因子:
4.5
作者:
[Ruan,Xiaoyang, Fu,Sunyang, Storlie,CurtisB, Mathis,KellieL, Larson,DavidW, Liu,Hongfang]
通讯作者:
Liu,Hongfang
Distinction between medical and non-medical usages of short forms in clinical narratives.
临床叙述中简短形式的医学和非医学用法的区别。
DOI:
--
发表时间:
2017
期刊:
AMIA ... Annual Symposium proceedings. AMIA Symposium
影响因子:
--
作者:
[Moon,Sungrim, Ihrke,Donna, Zeng,Yuqun, Liu,Hongfang]
通讯作者:
Liu,Hongfang
DOI:
10.1016/j.jbi.2015.07.008
发表时间:
2015-12
期刊:
Journal of biomedical informatics
影响因子:
4.5
作者:
[Zheng K, Vydiswaran VGV, Liu Y, Wang Y, Stubbs A, Uzuner Ö, Gururaj AE, Bayer S, Aberdeen J, Rumshisky A, Pakhomov S, Liu H, Xu H]
通讯作者:
Xu H
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资助金额:$72.37万
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Secondary use of EMRs for surgical complication surveillance
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批准号:10202598
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Secondary use of EMRs for surgical complication surveillance
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Secondary use of EMRs for surgical complication surveillance
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批准号:9251814
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Semi-structured Information Retrieval in Clinical Text for Cohort Identification
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批准号:8928647
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项目类别:
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资助金额:$16.0万
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财政年份:2013
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依托单位:
Natural language processing for clinical and translational research
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批准号:8640959
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资助金额:$58.01万
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Onto-BioThesaurus: ontological representation of gene/protein names for biomedica
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海外基金