Polymerase Chain Reaction-Single Strand Confirmation Polymorphism for the Detect

临床标本中微孢子虫的检测和分类有多种选择。光学显微镜可以检测到寄生虫，但不允许物种形成。电子显微镜是物种形成的金标准，但不是检测微孢子虫的灵敏方法。聚合酶链式反应(PCR)是一种敏感的技术，有许多不同的方法来确认阳性结果，并确定引起感染的属和种。物种鉴定可以通过在聚合酶链式反应分析中使用物种特定的引物，或者在进行聚合酶链式反应分析后使用DNA探针或限制性内切酶来确定物种。单链确认多态(SSCP)结合聚合酶链式反应(PCR-SSCP)已被用于细菌、真菌和病毒的鉴定。我们将使用我们的PCR方法来检测粪便标本中的微孢子虫，并应用SSCP来确定寄生虫的特定属和种。来自细胞培养的生物也将被用来验证该方法。该项目已经扩大到将SSCP应用于流行病学研究中的微孢子虫基因类型的检测。新公布的引物允许在用限制性内切酶消化聚合酶链式反应产物时形成物种。SSCP分析将使这项任务比限制性内切酶分析更容易和更敏感。我们已经在美国国立卫生研究院的微孢子虫病患者中检测到两种不同的比内氏肠胞体菌型，这将用于完成这项研究。

There are many options for the detection and speciation of microsporidia in clinical specimens. Light microscopy allows detection of the parasites, but does not allow speciation. Electron microscopy is the gold standard for speciation, but is not as sensitive a method for the detection of microsporidia. Polymerase chain reaction (PCR) is a sensitive technique with many different methods for confirming a positive result and for determining the genus and species causing an infection. Speciation can be achieved by using species-specific primers in the PCR assay, or by using DNA probes or restriction endonucleases to determine the species after the PCR assay is performed. Single-strand confirmation polymorphism (SSCP) combined with PCR (PCR-SSCP) has been used to identify bacteria, fungi, and viruses. We will use our PCR assay for the detection of microsporidia in stool specimens and apply SSCP to determine the specific genus and species of the parasite. Organisms from cell culture will also be used to validate the method.The project has been expanded to apply SSCP to the detection of microsporidial genotypes in epidemiologic studies. Newly published primers allow speciation when the PCR products are digested with restriction enzymes. SSCP analysis will make this task easier and more sensitive than restriction enzyme analysis. We have identified two different genotypes among the Enterocytozoon bieneusi detected in patients with microsporidiosis at the NIH, which will be used to finish this study.This project has been completed.