SELENIUM & BROMINE DOUBLE EDGE MAD EXPERIMENT FOR AN HSF DNA COMPLEX
SELENIUM & BROMINE DOUBLE EDGE MAD EXPERIMENT FOR AN HSF DNA COMPLEX
批准号:
6586596
负责人:
HILLARY C NELSON
金额:
$14.32万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2002
资助国家:
美国
项目状态:
已结题
起止时间:
2002-03-01 至 2003-02-28
中文摘要
我们使用多重异常人格(MAD)来确定
热的DNA结合结构域之间的复合物的结构
休克转录因子(HSF)沿着含有
其同源结合位点。 数据收集在晶体上,
硒代甲硫氨酸取代的蛋白质和溴尿嘧啶取代的DNA。
目前的模型包含完整的DNA,大部分蛋白质和100个
水分子 蛋白质单体缺少了
N-和C-末端,以及来自柔性环。 现公司
在6.0 ~ 2.5 E之间的所有数据的平均值为21.0%(游离R为29.3%)。
不存在Ramachandran离群值,r.m.s偏差为0.009 E
键长为1.5540,键角为1.5540。 结构表明,
DNA仅沿着与磷酸骨架接触,
大多数接触来自假定的识别螺旋,
DNA结合域。 我们正在解读
结构的生物学意义。
英文摘要
We have used multiple anomalous disperson (MAD) to determine the
structure of a complex between the DNA binding domain of the heat
shock transcription factor (HSF) along with a 12-mer of DNA containing
its cognate binding site. Data was collected on crystals containing
selenomethionine-substituted protein and bromouracil-substituted DNA.
The present model contains complete DNA, most of the protein, and 100
water molecules. The protein monomers are missing residues from the
N- and C-terminii, as well as from the flexible loop. The current R
value is 21.0% (free R is 29.3%) for all data between 6.0 and 2.5 E.
There are no Ramachandran outliers, the r.m.s deviations are 0.009 E
for bond lengths and 1.5540 for bond angles. The structure shows that
the DNA is contacted solely along with phosphate backbone, with the
majority of contacts coming from the putative recognition helix of the
DNA binding domain. We are in the process of interpreting the
biological implications of the structure.
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UPenn Post Baccalaureate Research Education Program
-
批准号:6964821
-
项目类别:
-
资助金额:$23.92万
-
财政年份:2005
-
负责人:HILLARY C NELSON
-
依托单位:
UPenn Post Baccalaureate Research Education Program
-
批准号:7125576
-
项目类别:
-
资助金额:$36.88万
-
财政年份:2005
-
负责人:HILLARY C NELSON
-
依托单位:
SELENIUM & BROMINE DOUBLE EDGE MAD EXPERIMENT FOR AN HSF DNA COMPLEX
-
批准号:6658563
-
项目类别:
-
资助金额:$14.32万
-
财政年份:2002
-
负责人:HILLARY C NELSON
-
依托单位:
USING MAD FOR AN HSF DNA COMPLEX
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批准号:6586594
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项目类别:
-
资助金额:$14.32万
-
财政年份:2002
-
负责人:HILLARY C NELSON
-
依托单位:
USING MAD FOR AN HSF DNA COMPLEX
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批准号:6658561
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项目类别:
-
资助金额:$14.32万
-
财政年份:2002
-
负责人:HILLARY C NELSON
-
依托单位:
CRYSTAL STRUCTURE OF FRAGMENTS OF HEAT SHOCK TRANSCRIPTION FACTOR
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批准号:6658550
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项目类别:
-
资助金额:$14.32万
-
财政年份:2002
-
负责人:HILLARY C NELSON
-
依托单位:
CRYSTAL STRUCTURE OF FRAGMENTS OF HEAT SHOCK TRANSCRIPTION FACTOR
-
批准号:6586583
-
项目类别:
-
资助金额:$14.32万
-
财政年份:2002
-
负责人:HILLARY C NELSON
-
依托单位:
USING MAD FOR AN HSF DNA COMPLEX
-
批准号:6437512
-
项目类别:
-
资助金额:$14.32万
-
财政年份:2001
-
负责人:HILLARY C NELSON
-
依托单位:
SELENIUM & BROMINE DOUBLE EDGE MAD EXPERIMENT FOR AN HSF DNA COMPLEX
-
批准号:6437514
-
项目类别:
-
资助金额:$14.32万
-
财政年份:2001
-
负责人:HILLARY C NELSON
-
依托单位:
CRYSTAL STRUCTURE OF FRAGMENTS OF HEAT SHOCK TRANSCRIPTION FACTOR
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批准号:6437501
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项目类别:
-
资助金额:$14.32万
-
财政年份:2001
-
负责人:HILLARY C NELSON
-
依托单位:
USING MAD FOR AN HSF DNA COMPLEX
-
批准号:6250635
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项目类别:
-
资助金额:$0.42万
-
财政年份:1997
-
负责人:HILLARY C NELSON
-
依托单位:
SELENIUM & BROMINE DOUBLE EDGE MAD EXPERIMENT FOR AN HSF DNA COMPLEX
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批准号:6250637
-
项目类别:
-
资助金额:$0.42万
-
财政年份:1997
-
负责人:HILLARY C NELSON
-
依托单位:
CRYSTAL STRUCTURE OF FRAGMENTS OF HEAT SHOCK TRANSCRIPTION FACTOR
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批准号:6250647
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项目类别:
-
资助金额:$0.42万
-
财政年份:1997
-
负责人:HILLARY C NELSON
-
依托单位:
STRUCTURE OF HEAT SHOCK TRANSCRIPTION FACTOR FROM YEAST
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批准号:2182365
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项目类别:
-
资助金额:$20.45万
-
财政年份:1990
-
负责人:HILLARY C NELSON
-
依托单位:
STRUCTURE OF HEAT SHOCK TRANSCRIPTION FACTOR FROM YEAST
-
批准号:3303255
-
项目类别:
-
资助金额:$13.98万
-
财政年份:1990
-
负责人:HILLARY C NELSON
-
依托单位:
Structure of Heat Shock Transcription Factor from Yeast
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批准号:6842055
-
项目类别:
-
资助金额:$3.45万
-
财政年份:1990
-
负责人:HILLARY C NELSON
-
依托单位:
STRUCTURE OF HEAT SHOCK TRANSCRIPTION FACTOR FROM YEAST
-
批准号:3303259
-
项目类别:
-
资助金额:$15.47万
-
财政年份:1990
-
负责人:HILLARY C NELSON
-
依托单位:
STRUCTURE OF HEAT SHOCK TRANSCRIPTION FACTOR FROM YEAST
-
批准号:2182363
-
项目类别:
-
资助金额:$18.85万
-
财政年份:1990
-
负责人:HILLARY C NELSON
-
依托单位:
STRUCTURE OF HEAT SHOCK TRANSCRIPTION FACTOR FROM YEAST
-
批准号:2603462
-
项目类别:
-
资助金额:$19.75万
-
财政年份:1990
-
负责人:HILLARY C NELSON
-
依托单位:
STRUCTURE OF HEAT SHOCK TRANSCRIPTION FACTOR FROM YEAST
-
批准号:6385992
-
项目类别:
-
资助金额:$26.4万
-
财政年份:1990
-
负责人:HILLARY C NELSON
-
依托单位:
海外基金