Analysis Of Cell Fate Acquisition In the Retina

视网膜细胞命运获取的分析

• 批准号: 6929008
• 负责人: JAREMA MALICKI
• 金额: $ 22.2万
• 依托单位: MASSACHUSETTS EYE AND EAR INFIRMARY
• 依托单位国家: 美国
• 财政年份: 2003
• 资助国家: 美国
• 起止时间: 2003-08-01 至 2007-07-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/6929008
• 关键词: active sites; binding sites; cell type; developmental genetics; developmental neurobiology; functional /structural genomics; genetic mapping; in situ hybridization; protein protein interaction; protein structure function; retina; zebrafish

DESCRIPTION (provided by applicant): The vertebrate retina consists of seven major cell types organized with striking precision in a laminar pattern. During embryogenesis, all retinal neurons arise from a morphologically uniform population of neuroepithelial cells. In the mature retina, individual neuronal categories are characterized by distinct functions, positions, and morphologies. We would like to determine what genetic mechanisms confer these unique identities on the retinal neurons and glia. To identify the genetic loci involved in cell fate acquisition in the retina, we took a reverse genetic approach. Our collaborators and we took advantage of the extrauterine development and transparency of the zebrafish embryo to search for genes expressed in cell-class restricted patterns at the earliest stages of neuronal development in the retina. An in situ screen of over 7,000 clones revealed 9 that display these characteristics. The structure and function of these 9 genes will be characterized further. Structural characterization will reveal molecular motifs, such as protein-protein interaction interfaces, DNA binding domains, and catalytic sites providing insights into biochemical function. Functional characterization will take advantage of two techniques. First, we will use the recently introduced technique of gene knockdown to abolish function of individual genes. Second, we will express the genes under investigation in excess of the normal level. The phenotypic abnormalities produced by these experimental manipulations will reveal the roles these genes play in the development of the retina. As very few factors are known to be involved in early cell fate acquisition in the retina, these studies may provide key insights into this process. Characterization of cell-class restricted genes selected in a large-scale in situ hybridization screen described here will open a number of exciting research opportunities. Studies of their functions in higher vertebrates including humans may reveal relationships to human disorders such as photoreceptor dystrophies and glaucoma and may provide tools for the treatment of these disorders.

描述(申请人提供)：脊椎动物视网膜由七种主要细胞类型组成，以层状模式组织，具有惊人的精度。在胚胎发育过程中，所有视网膜神经元都是从形态一致的神经上皮细胞群中分化出来的。在成熟的视网膜中，单个神经元类别具有不同的功能、位置和形态。我们想要确定是什么遗传机制赋予了视网膜神经元和胶质细胞这些独特的身份。 为了确定与视网膜细胞命运获得有关的遗传位点，我们采取了反向遗传方法。我们的合作者和我们利用斑马鱼胚胎的宫外发育和透明度来寻找在视网膜神经元发育的早期阶段以细胞级限制性模式表达的基因。由7000多个克隆组成的现场屏幕显示了9个显示这些特征的克隆。这9个基因的结构和功能将进一步确定。结构特征将揭示分子基序，如蛋白质-蛋白质相互作用界面、DNA结合域和催化位点，为深入了解生化功能提供信息。功能表征将利用两种技术。首先，我们将使用最近引入的基因敲除技术来取消单个基因的功能。第二，我们将在研究中的基因超过正常水平进行表达。这些实验操作产生的表型异常将揭示这些基因在视网膜发育中所起的作用。由于目前已知的与视网膜早期细胞命运获得有关的因素很少，这些研究可能为这一过程提供关键的见解。 在这里描述的大规模原位杂交筛选中选择的细胞级限制性基因的特征将开启许多令人兴奋的研究机会。对它们在包括人类在内的高等脊椎动物中的功能的研究可能会揭示它们与人类疾病的关系，如光感受器营养不良和青光眼，并可能为这些疾病的治疗提供工具。