BIOCORE

生物核心

• 批准号: 7369104
• 负责人: LAXMIKANT V KALE
• 金额: $ 15.44万
• 依托单位: UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN
• 依托单位国家: 美国
• 财政年份: 2006
• 资助国家: 美国
• 起止时间: 2006-08-01 至 2007-07-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7369104
• 关键词: BIOCORE

This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. BioCoRE [114] (http://www.ks.uiuc.edu/Research/biocore/) is a web-based collaborative environment designed to enhance biomedical research and training. By using a standard web-browser (on a desktop or laptop computer or handheld PDA) scientists create projects in which all private data is secure and is shared only within the specific project team. Researchers use BioCoRE to create input files for supercomputer runs, submit jobs to remote sites including supercomputers, and share the visualization of molecular systems across distances. BioCoRE features a synchronous and asynchronous chat, a project-wide ¿bookmarks¿ file for sharing web links, as well as a web-based filesystem. Summary pages within BioCoRE regularly inform the project team of the project status. Major BioCoRE developments in the past year include a programming interface for supercomputer job submission that allows other programs to easily use BioCoRE to submit computational jobs, and a plugin for VMD that allows users to interact with BioCoRE in a convenient way. In addition, BioCoRE became more ¿open¿ in the past year ¿ non-members can now view information about public projects within BioCoRE without registering, and a new ¿guest user¿ has been added where users can register for BioCoRE much more quickly than before. Future BioCoRE efforts will focus on tighter integration with other biomedical packages, such as VMD and NAMD.

该子项目是利用NIH/NCRR资助的中心赠款提供的资源的许多研究子项目之一。子项目和研究者（PI）可能从另一个NIH来源获得主要资金，因此可以在其他CRISP条目中表示。所列机构为中心，不一定是研究者所在机构。BioCoRE [114]（http：//www.ks.uiuc.edu/Research/biocore/）是一个基于网络的协作环境，旨在加强生物医学研究和培训。通过使用标准的网络浏览器（在台式机或笔记本电脑或手持PDA上），科学家创建的项目中所有私人数据都是安全的，并且只在特定的项目团队中共享。研究人员使用BioCoRE创建超级计算机运行的输入文件，将作业提交到包括超级计算机在内的远程站点，并跨距离共享分子系统的可视化。BioCoRE具有同步和异步聊天功能，用于共享Web链接的项目范围内的书签文件，以及基于Web的文件系统。BioCoRE中的摘要页面定期向项目团队通报项目状态。 BioCoRE在过去一年中的主要发展包括超级计算机作业提交的编程接口，允许其他程序轻松使用BioCoRE提交计算作业，以及VMD的插件，允许用户以方便的方式与BioCoRE交互。此外，BioCoRE在过去一年变得更加开放，非会员现在可以在BioCoRE中查看有关公共项目的信息，而无需注册，并且增加了一个新的访客用户，用户可以比以前更快地注册BioCoRE。 未来BioCoRE的工作将集中在与其他生物医学软件包（如VMD和NAMD）的更紧密集成上。