STRUCTURE AND NUCLEOLAR FUNCTION OF SARS N PROTEIN

SARS N蛋白的结构和核仁功能

• 批准号: 7720673
• 负责人: RAYMOND ROWLAND
• 金额: $ 3.92万
• 依托单位: UNIVERSITY OF KANSAS LAWRENCE
• 依托单位国家: 美国
• 财政年份: 2008
• 资助国家: 美国
• 起止时间: 2008-05-15 至 2009-03-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7720673
• 关键词: Antibodies; Antiviral Agents; Cell Nucleolus; Cell Nucleus; Cells; Centers of Research Excellence; Collaborations; Computer Retrieval of Information on Scientific Projects Database; Confocal Microscopy; Coronavirus; Coronavirus Infections; Coronavirus nucleocapsid protein; Cytoplasm; Development; Diagnosis; Disease; Funding; Future; Grant; Institution; Localized; Modeling; Monoclonal Antibodies; Nuclear Protein; Nuclear Proteins; Nucleocapsid; Proteins; Reagent; Research; Research Personnel; Resources; SARS coronavirus; SARS-CoV N protein; Severe Acute Respiratory Syndrome; Side; Source; Staining method; Stains; Structural Models; Structure; Tertiary Protein Structure; Testing; United States National Institutes of Health; Viral; Virus; Virus Diseases; Work; citrate carrier; design; enhanced green fluorescent protein; nucleocytoplasmic transport; protein purification; protein structure function; research study

This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. Severe acute respiratory syndrome coronavirus (SARS CoV) is an important emerging disease-causing agent, but very little is known about how SARS CoV causes disease. We propose a model in which the SARS CoV nucleocapsid (N) protein is proposed to localize to the nucleolus of the host cell during virus infection and alter nucleolar function: an important viral strategy designed to harm the host cell while benefiting the replicating virus. The analysis of the SARS virus N protein shows several regions that are predicted to be involved in the localization of the N protein to the nucleolus. The first part of this project is to determine if SARS CoV N protein does in fact localize to the nucleolus, and to characterize the protein domains involved in transporting N into the nucleus and nucleolus. The second part, in collaboration with the COBRE Core C Protein Purification Group, is to construct a detailed structural model of the N protein, which will be used in future studies to better understand the mechanism of how the SARS virus causes disease and identify targets for potential antiviral drugs. To study the N protein in SARS CoV-infected cells, we developed several monoclonal antibody (mAb) reagents. To our surprise, confocal microscopy of infected cells stained with the N-specific mAb, 46-4, showed clearly that N protein fails to localize in the nucleus or nucleolus as originally predicted. Similar results were obtained for N expressed alone or tagged with enhanced green fluorescent protein (EGFP). Lack of nuclear transport activity was an unexpected finding, but was confirmed in several experiments. Even though the N protein of SARS CoV is predicted to be a nuclear protein, it does not localize to the nucleolus and is primarily retained in the cytoplasm. We are currently investigating the structure of N as a means to determine why it fails to localize to the nucleus. An important side benefit of this work is the creation of several antibody reagents, which will further enhance the understanding of SARS CoV N protein structure and function and prove useful for the development of N protein-specific tests for the diagnosis of SARS CoV infection.

这个子项目是许多研究子项目中的一个 由NIH/NCRR资助的中心赠款提供的资源。子项目和 研究者（PI）可能从另一个NIH来源获得了主要资金， 因此可以在其他CRISP条目中表示。所列机构为 研究中心，而研究中心不一定是研究者所在的机构。 严重急性呼吸综合征冠状病毒（SARS CoV）是一种重要的新兴致病因子，但目前对SARS CoV致病机制的研究还很少。我们提出了一个模型，在该模型中，SARS冠状病毒核衣壳（N）蛋白被建议定位于病毒感染过程中宿主细胞的核仁，并改变核仁功能：一个重要的病毒策略，旨在损害宿主细胞，同时有利于复制病毒。对SARS病毒N蛋白的分析显示了几个区域，这些区域被预测参与N蛋白到核仁的定位。 该项目的第一部分是确定SARS CoV N蛋白是否确实定位于核仁，并表征参与将N转运到细胞核和核仁的蛋白质结构域。第二部分与COBRE核心C蛋白纯化组合作，构建N蛋白的详细结构模型，将用于未来的研究，以更好地了解SARS病毒如何致病的机制，并确定潜在抗病毒药物的靶点。为了研究SARS冠状病毒感染细胞中的N蛋白，我们开发了几种单克隆抗体（mAb）试剂。令我们惊讶的是，用N特异性mAb 46-4染色的感染细胞的共聚焦显微镜清楚地显示，N蛋白未能如最初预测的那样定位在细胞核或核仁中。对于单独表达或用增强型绿色荧光蛋白（EGFP）标记的N，获得了类似的结果。缺乏核运输活动是一个意想不到的发现，但在几个实验中得到了证实。尽管SARS冠状病毒的N蛋白被预测为核蛋白，但它不定位于核仁，主要保留在细胞质中。我们目前正在研究N的结构，以确定为什么它不能定位于细胞核。这项工作的一个重要的副作用是创造了几种抗体试剂，这将进一步提高SARS冠状病毒N蛋白的结构和功能的理解，并证明有用的N蛋白特异性检测SARS冠状病毒感染的诊断的发展。