CRYSTALLOGRAPHIC STUDIES OF ANTIBIOTIC RESISTANCE AND SIGNAL TRANSDUCTION
CRYSTALLOGRAPHIC STUDIES OF ANTIBIOTIC RESISTANCE AND SIGNAL TRANSDUCTION
批准号:
7726243
负责人:
FOCCO VAN DEN AKKER
金额:
$0.49万
依托单位国家:
美国
项目类别:
财政年份:
2008
资助国家:
美国
项目状态:
已结题
起止时间:
2008-09-18 至 2009-06-30
关键词:
Antibiotic ResistanceAntibioticsBacteriaBacterial InfectionsBindingClavulanic AcidClavulanic AcidsComplexComputer Retrieval of Information on Scientific Projects DatabaseCrystallographyCyclic NucleotidesDevelopmentFundingGrantHousingHumanHydrogenInfectionInstitutionIon ChannelLactamasePopulationReactionResearchResearch PersonnelResistanceResourcesSignal TransductionSolutionsSourceStructureSulbactamTazobactamTimeUnited States National Institutes of HealthVariantbacterial resistancebeta-Lactamasedesigninhibitor/antagonistnovelnovel strategiesultra high resolution
中文摘要
这个子项目是许多研究子项目中利用
资源由NIH/NCRR资助的中心拨款提供。子项目和
调查员(PI)可能从NIH的另一个来源获得了主要资金,
并因此可以在其他清晰的条目中表示。列出的机构是
该中心不一定是调查人员的机构。
对细菌感染产生抗药性是对人类的严重威胁,在很大程度上是对细菌内酰胺酶的抗药性。治疗感染的一个有效的解决方案是联合使用一种内酰胺酶抑制剂(如他唑巴坦、舒巴坦和克拉维酸),不幸的是,这种药物已经出现了耐药性。我们的建议侧重于在原子水平上描述新型内酰胺酶变异体的抗药性。我们捕捉反应中间体的新方法是使用内部拉曼结晶学来预先表征被缓蚀剂浸泡的晶体,并确定中间体的类型以及该中间体相对于时间的数量,这导致了此类络合物的三种晶体结构(Padayatti等人,JBC 2004&2005)。目前的努力集中在SHVβ-内酰胺酶的抗药性变体上,即与新设计的抑制剂形成的复合体。需要高分辨率和超高分辨率的结构来研究预期的微妙构象变化,以及定位作为反应机理一部分的氢。此外,我们还从细菌中结晶了4个不同的环核苷酸结合域,它们与离子通道的环核苷酸结合域具有显著的同源性。
英文摘要
This subproject is one of many research subprojects utilizing the
resources provided by a Center grant funded by NIH/NCRR. The subproject and
investigator (PI) may have received primary funding from another NIH source,
and thus could be represented in other CRISP entries. The institution listed is
for the Center, which is not necessarily the institution for the investigator.
The development of antibiotic resistance to bacterial infections is a serious human threats and in large part to bacterial ¿¿¿¿¿¿-lactamases. A powerful solution for treating infections is the co-administration of a ¿¿¿¿¿¿-lactamase inhibitor (such as tazobactam, sulbactam, and clavulanic acid) to which unfortunately resistance has emerged. Our proposal is focused on delineating at an atomic level the inhibitor resistance of the novel ¿¿¿¿¿¿-lactamase variants. Our novel approach to trap reaction intermediates is to use in-house Raman crystallography to pre-characterize the inhibitor soaked crystals and determine the type of intermediate as well as the population of this intermediate with respect to time which resulted in three crystal structures of such complexes (Padayatti et al., JBC 2004 & 2005). Current efforts are to focus on inhibitor resistance variants of SHV beta-lactamase, complexes with novel designed inhibitors. High and ultra-high resolution structures are needed to investigate the subtle conformational changes that are expected as well as locate hydrogens that are part of the reaction mechanism. In addition, we have crystallized 4 different cyclic nucleotide binding domains from bacteria that show a significant homology with that of ion channels.
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科研奖励(0)
会议论文
Developing novel pyrazolidinone antibiotics targeting PBP3 to overcome resistance mechanisms
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批准号:10590839
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项目类别:
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资助金额:$24.15万
-
财政年份:2023
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负责人:FOCCO VAN DEN AKKER
-
依托单位:
Targeting Escherichia coli PBP1b using fragment-based approaches
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批准号:10374158
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项目类别:
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资助金额:$24.15万
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财政年份:2021
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负责人:FOCCO VAN DEN AKKER
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依托单位:
Targeting Escherichia coli PBP1b using fragment-based approaches
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批准号:10217694
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项目类别:
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资助金额:$20.13万
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财政年份:2021
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负责人:FOCCO VAN DEN AKKER
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依托单位:
Small molecule inhibitors of lytic transglycosylase to potentiate beta-lactam antibiotics
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批准号:10078254
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项目类别:
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资助金额:$21.01万
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财政年份:2020
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负责人:FOCCO VAN DEN AKKER
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依托单位:
CRYSTALLOGRAPHIC STUDIES OF ANTIBIOTIC RESISTANCE PROTEINS AND SIGNAL TRANSDUCTI
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批准号:8362188
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项目类别:
-
资助金额:$0.14万
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财政年份:2011
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负责人:FOCCO VAN DEN AKKER
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依托单位:
CRYSTALLOGRAPHIC STUDIES OF ANTIBIOTIC RESISTANCE PROTEINS AND SIGNAL TRANSDUCTI
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批准号:8170149
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项目类别:
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资助金额:$0.37万
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财政年份:2010
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负责人:FOCCO VAN DEN AKKER
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依托单位:
CRYSTALLOGRAPHIC STUDIES OF ANTIBIOTIC RESISTANCE PROTEINS AND SIGNAL TRANSDUCTI
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批准号:7954491
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项目类别:
-
资助金额:$0.21万
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财政年份:2009
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负责人:FOCCO VAN DEN AKKER
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依托单位:
Mechanistic studies and inhibition strategies for antibiotic resistance
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批准号:7884373
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项目类别:
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资助金额:$26.26万
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财政年份:2007
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负责人:FOCCO VAN DEN AKKER
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依托单位:
CRYSTALLOGRAPHIC STUDIES OF ANTIBIOTIC RESISTANCE AND SIGNAL TRANSDUCTION
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批准号:7602310
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项目类别:
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资助金额:$0.39万
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财政年份:2007
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负责人:FOCCO VAN DEN AKKER
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依托单位:
Mechanistic studies and inhibition strategies for antibiotic resistance
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批准号:7658125
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项目类别:
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资助金额:$26.52万
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财政年份:2007
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负责人:FOCCO VAN DEN AKKER
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依托单位:
Mechanistic studies and inhibition strategies for antibiotic resistance
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批准号:7321256
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项目类别:
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资助金额:$27.04万
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财政年份:2007
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负责人:FOCCO VAN DEN AKKER
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依托单位:
Mechanistic studies and inhibition strategies for antibiotic resistance
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批准号:7463633
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项目类别:
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资助金额:$26.52万
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财政年份:2007
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负责人:FOCCO VAN DEN AKKER
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依托单位:
CRYSTALLOGRAPHIC STUDIES OF ANTIBIOTIC RESISTANCE AND SIGNAL TRANSDUCTION
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批准号:7358960
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项目类别:
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资助金额:$0.55万
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财政年份:2006
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负责人:FOCCO VAN DEN AKKER
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依托单位:
Mechanism of activation of natriuretic peptide receptors
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批准号:6922718
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项目类别:
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资助金额:$30.34万
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财政年份:2005
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负责人:FOCCO VAN DEN AKKER
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依托单位:
Mechanism of activation of natriuretic peptide receptors
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批准号:7260277
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项目类别:
-
资助金额:$29.3万
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财政年份:2005
-
负责人:FOCCO VAN DEN AKKER
-
依托单位:
Mechanism of activation of natriuretic peptide receptors
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批准号:7470727
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项目类别:
-
资助金额:$29.3万
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财政年份:2005
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负责人:FOCCO VAN DEN AKKER
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依托单位:
Mechanism of activation of natriuretic peptide receptors
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批准号:7092182
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项目类别:
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资助金额:$30.17万
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财政年份:2005
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负责人:FOCCO VAN DEN AKKER
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依托单位:
Soluble guanylyl cyclase: mechanisms of activation and modulation
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批准号:8255502
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项目类别:
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资助金额:$39.25万
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财政年份:2005
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负责人:FOCCO VAN DEN AKKER
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依托单位:
Molecular mechanisms of antibiotic resistance
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批准号:7064635
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项目类别:
-
资助金额:$27.04万
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财政年份:2005
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负责人:FOCCO VAN DEN AKKER
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依托单位:
Soluble guanylyl cyclase: mechanisms of activation and modulation
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批准号:8104709
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项目类别:
-
资助金额:$39.25万
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财政年份:2005
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负责人:FOCCO VAN DEN AKKER
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依托单位:
海外基金