Membrane Protein Stability
膜蛋白稳定性
基本信息
- 批准号:7846120
- 负责人:
- 金额:$ 33.23万
- 依托单位:
- 依托单位国家:美国
- 项目类别:
- 财政年份:2009
- 资助国家:美国
- 起止时间:2009-06-01 至 2013-05-31
- 项目状态:已结题
- 来源:
- 关键词:AddressBehaviorBiologicalBiological AssayCellsCircular DichroismCystic FibrosisDataDatabasesDiseaseEnvironmentEscherichia coliFluorescenceFluorescence SpectroscopyFree EnergyGene MutationGoalsHeadHumanIn VitroIonic StrengthsKineticsKnowledgeLeadLipid BilayersLipidsMapsMeasuresMedicalMembraneMembrane ProteinsMolecularMolecular ChaperonesMolecular ConformationMutationNaturePathway interactionsPeptide HydrolasesPharmacologic SubstancePhasePlayProcessProteinsRoleStructural ProteinStructureStructure-Activity RelationshipSurfaceTemperatureTherapeutic AgentsThermodynamicsTimeVesicleWorkanalytical ultracentrifugationbasecombatdesignhuman diseasein vivoinsightmolecular dynamicsprotein foldingprotein misfoldingpublic health relevanceresearch studytherapy development
项目摘要
DESCRIPTION (provided by applicant): Membrane proteins are important pharmaceutical targets and play essential roles in cells, and misfolding of membrane proteins is associated with human diseases, such as cystic fibrosis. The ability to develop therapies for membrane protein misfolding diseases is substantially limited by the lack of data on membrane protein folding and stability. In addition to the native states, we need to understand the conformations and stabilities of unfolded, partially folded, and misfolded membrane proteins. Compared to soluble proteins, whose folding has been studied for decades, the database of thermodynamic and mechanistic information on membrane protein folding is minute. Since biophysical folding studies can provide detailed access to sequence-structure- function relationships that no in vivo studies or crystal structures can provide, there is a need for additional quantitative studies of membrane proteins to better understand their physical origins. In this proposal we address this lack of information on membrane protein folding. We will study 8 outer membrane proteins, OmpX, OmpW, OmpA, PagP, OmpT, OmpLa, FadL and Omp85. Our work will double the number of unique membrane proteins whose folding has been interrogated in lipid bilayers. In the first aim, we will establish in vitro conditions under which they fold into membranes prepared from native lipid extracts. In a second aim, we will use kinetic and thermodynamic experiments employing SDS-PAGE, circular dichroism, fluorescence spectroscopy and analytical ultracentrifugation to determine the steps involved in folding and to ascertain why membrane proteins differ in their folding propensities. In the final aim we address how membrane proteins accommodate the introduction of ionizable mutations on the lipid facing surfaces of their membrane spanning regions. These experiments will provide insight into the mechanisms of how genetically-occurring ionizable group mutations cause malfunctions in human proteins. PUBLIC HEALTH RELEVANCE: Little is known about the dynamical process of membrane protein folding, and human diseases occur when membrane proteins misfold. An understanding of the factors that influence membrane protein stability and membrane protein folding will find practical utility in rationalizing the effects of genetic mutations that occur in membrane proteins. This knowledge will ultimately be useful in the design of therapeutic agents to combat disease.
描述(由申请人提供):膜蛋白是重要的药物靶点,在细胞中发挥重要作用,膜蛋白的错误折叠与人类疾病相关,如囊性纤维化。由于缺乏膜蛋白折叠和稳定性的数据,开发膜蛋白错误折叠疾病的治疗方法的能力受到很大限制。除了天然状态,我们还需要了解未折叠、部分折叠和错误折叠的膜蛋白的构象和稳定性。相对于可溶性蛋白质,其折叠已经研究了几十年,膜蛋白质折叠的热力学和机械信息的数据库是微小的。由于生物物理折叠研究可以提供详细的序列-结构-功能的关系,没有在体内的研究或晶体结构可以提供,有必要进行额外的定量研究膜蛋白,以更好地了解他们的物理起源。在这个建议中,我们解决了缺乏膜蛋白折叠的信息。我们将研究8种外膜蛋白,OmpX,OmpW,OmpA,PagP,OmpT,OmpLa,FadL和Omp 85。我们的工作将增加一倍的独特的膜蛋白,其折叠已在脂质双层审问的数量。在第一个目标,我们将建立在体外条件下,他们折叠成膜制备的天然脂质提取物。在第二个目标中,我们将使用动力学和热力学实验,采用SDS-PAGE,圆二色性,荧光光谱和分析ultracenthegation,以确定折叠所涉及的步骤,并确定为什么膜蛋白在其折叠倾向不同。在最后的目标,我们解决了膜蛋白如何适应其跨膜区域的脂质面对表面上的电离突变的引入。这些实验将提供深入了解遗传发生的电离基团突变如何导致人类蛋白质故障的机制。公共卫生相关性:目前对膜蛋白折叠的动力学过程知之甚少,膜蛋白错误折叠会导致人类疾病的发生。了解影响膜蛋白稳定性和膜蛋白折叠的因素将在合理化膜蛋白中发生的基因突变的影响中找到实际效用。这些知识最终将有助于设计治疗药物来对抗疾病。
项目成果
期刊论文数量(0)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
数据更新时间:{{ journalArticles.updateTime }}
{{
item.title }}
{{ item.translation_title }}
- DOI:
{{ item.doi }} - 发表时间:
{{ item.publish_year }} - 期刊:
- 影响因子:{{ item.factor }}
- 作者:
{{ item.authors }} - 通讯作者:
{{ item.author }}
数据更新时间:{{ journalArticles.updateTime }}
{{ item.title }}
- 作者:
{{ item.author }}
数据更新时间:{{ monograph.updateTime }}
{{ item.title }}
- 作者:
{{ item.author }}
数据更新时间:{{ sciAawards.updateTime }}
{{ item.title }}
- 作者:
{{ item.author }}
数据更新时间:{{ conferencePapers.updateTime }}
{{ item.title }}
- 作者:
{{ item.author }}
数据更新时间:{{ patent.updateTime }}
Karen G. Fleming其他文献
Energetics of Dimeric FkpA Binding to a Native Unfolded Membrane Protein Client
- DOI:
10.1016/j.bpj.2019.11.2101 - 发表时间:
2020-02-07 - 期刊:
- 影响因子:
- 作者:
Michaela A. Roskopf;Dagan C. Marx;Karen G. Fleming - 通讯作者:
Karen G. Fleming
A team of chaperones play to win in the bacterial periplasm
一组伴侣蛋白力争在细菌周质中发挥作用 。
- DOI:
10.1016/j.tibs.2024.03.015 - 发表时间:
2024-08-01 - 期刊:
- 影响因子:11.000
- 作者:
Taylor Devlin;Karen G. Fleming - 通讯作者:
Karen G. Fleming
Towards Understanding How Water Modulates Membrane Protein Stability
- DOI:
10.1016/j.bpj.2019.11.325 - 发表时间:
2020-02-07 - 期刊:
- 影响因子:
- 作者:
Dagan C. Marx;Karen G. Fleming - 通讯作者:
Karen G. Fleming
FkpA enhances outer membrane protein folding using an extensive interaction interface
- DOI:
10.1016/j.bpj.2023.11.1353 - 发表时间:
2024-02-08 - 期刊:
- 影响因子:
- 作者:
Taylor A. Devlin;Dagan C. Marx;Anneliese Faustino;Michaela Roskopf;Stephen D. Fried;Karen G. Fleming - 通讯作者:
Karen G. Fleming
Measuring The Energetic Cost Of Burying An Arginine Sidechain Into A Lipid Bilayer Using A Transmembrane Protein
- DOI:
10.1016/j.bpj.2008.12.1766 - 发表时间:
2009-02-01 - 期刊:
- 影响因子:
- 作者:
Preston Moon;Karen G. Fleming - 通讯作者:
Karen G. Fleming
Karen G. Fleming的其他文献
{{
item.title }}
{{ item.translation_title }}
- DOI:
{{ item.doi }} - 发表时间:
{{ item.publish_year }} - 期刊:
- 影响因子:{{ item.factor }}
- 作者:
{{ item.authors }} - 通讯作者:
{{ item.author }}
{{ truncateString('Karen G. Fleming', 18)}}的其他基金
2010 Biomolecular Interactions & Methods GRC & GRS
2010 生物分子相互作用
- 批准号:
7800232 - 财政年份:2009
- 资助金额:
$ 33.23万 - 项目类别:
相似国自然基金
greenwashing behavior in China:Basedon an integrated view of reconfiguration of environmental authority and decoupling logic
- 批准号:
- 批准年份:2024
- 资助金额:万元
- 项目类别:外国学者研究基金项目
相似海外基金
METABOLISM: accelerator Mass SpEctrometry to quanTify nanoplastics and decipher their fAte and Behavior in envirOnmentaL and bIological SysteMs
代谢:加速器质谱法可量化纳米塑料并破译其在环境和生物系统中的命运和行为
- 批准号:
EP/Y002733/1 - 财政年份:2024
- 资助金额:
$ 33.23万 - 项目类别:
Research Grant
REU Site: Ecology, Evolution, and Behavior Field Research at Mountain Lake Biological Station
REU 站点:山湖生物站的生态、进化和行为领域研究
- 批准号:
2349462 - 财政年份:2024
- 资助金额:
$ 33.23万 - 项目类别:
Standard Grant
BRITE Pivot: Growing Biological Methods to Improve Soil Behavior for Infrastructure Protection
BRITE 支点:不断发展生物方法来改善土壤行为以保护基础设施
- 批准号:
2227491 - 财政年份:2023
- 资助金额:
$ 33.23万 - 项目类别:
Standard Grant
Biological Mechanisms of Suicidal Behavior among Sexual Minority Adolescents - Supplement
性少数青少年自杀行为的生物学机制 - 补充
- 批准号:
10823709 - 财政年份:2023
- 资助金额:
$ 33.23万 - 项目类别:
The role of biological interactions in the evolution of animal behavior
生物相互作用在动物行为进化中的作用
- 批准号:
RGPIN-2019-06689 - 财政年份:2022
- 资助金额:
$ 33.23万 - 项目类别:
Discovery Grants Program - Individual
The virtual rodent: a platform to study the artificial and biological control of natural behavior
虚拟啮齿动物:研究自然行为的人工和生物控制的平台
- 批准号:
10540574 - 财政年份:2022
- 资助金额:
$ 33.23万 - 项目类别:
The Virtual Rodent: A Platform to Study the Artificial and Biological Control of Natural Behavior
虚拟啮齿动物:研究自然行为的人工和生物控制的平台
- 批准号:
10633144 - 财政年份:2022
- 资助金额:
$ 33.23万 - 项目类别:
Schooling through Vortex Streets; A Biological and Computational Approach to Understanding Collective Behavior in Wild Fish
通过涡街 (Vortex Street) 上学;
- 批准号:
2102891 - 财政年份:2021
- 资助金额:
$ 33.23万 - 项目类别:
Continuing Grant
The role of biological interactions in the evolution of animal behavior
生物相互作用在动物行为进化中的作用
- 批准号:
RGPIN-2019-06689 - 财政年份:2021
- 资助金额:
$ 33.23万 - 项目类别:
Discovery Grants Program - Individual
REU Site: Biological Basis of Social Behavior
REU 网站:社会行为的生物学基础
- 批准号:
1852338 - 财政年份:2020
- 资助金额:
$ 33.23万 - 项目类别:
Continuing Grant