Membrane Protein Stability

膜蛋白稳定性

• 批准号: 7846120
• 负责人: Karen G. Fleming
• 金额: $ 33.23万
• 依托单位: JOHNS HOPKINS UNIVERSITY
• 依托单位国家: 美国
• 财政年份: 2009
• 资助国家: 美国
• 起止时间: 2009-06-01 至 2013-05-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7846120
• 关键词: Address; Behavior; Biological; Biological Assay; Cells; Circular Dichroism; Cystic Fibrosis; Data; Databases; Disease; Environment; Escherichia coli; Fluorescence; Fluorescence Spectroscopy; Free Energy; Gene Mutation; Goals; Head; Human; In Vitro; Ionic Strengths; Kinetics; Knowledge; Lead; Lipid Bilayers; Lipids; Maps; Measures; Medical; Membrane; Membrane Proteins; Molecular; Molecular Chaperones; Molecular Conformation; Mutation; Nature; Pathway interactions; Peptide Hydrolases; Pharmacologic Substance; Phase; Play; Process; Proteins; Role; Structural Protein; Structure; Structure-Activity Relationship; Surface; Temperature; Therapeutic Agents; Thermodynamics; Time; Vesicle; Work; analytical ultracentrifugation; base; combat; design; human disease; in vivo; insight; molecular dynamics; protein folding; protein misfolding; public health relevance; research study; therapy development

DESCRIPTION (provided by applicant): Membrane proteins are important pharmaceutical targets and play essential roles in cells, and misfolding of membrane proteins is associated with human diseases, such as cystic fibrosis. The ability to develop therapies for membrane protein misfolding diseases is substantially limited by the lack of data on membrane protein folding and stability. In addition to the native states, we need to understand the conformations and stabilities of unfolded, partially folded, and misfolded membrane proteins. Compared to soluble proteins, whose folding has been studied for decades, the database of thermodynamic and mechanistic information on membrane protein folding is minute. Since biophysical folding studies can provide detailed access to sequence-structure- function relationships that no in vivo studies or crystal structures can provide, there is a need for additional quantitative studies of membrane proteins to better understand their physical origins. In this proposal we address this lack of information on membrane protein folding. We will study 8 outer membrane proteins, OmpX, OmpW, OmpA, PagP, OmpT, OmpLa, FadL and Omp85. Our work will double the number of unique membrane proteins whose folding has been interrogated in lipid bilayers. In the first aim, we will establish in vitro conditions under which they fold into membranes prepared from native lipid extracts. In a second aim, we will use kinetic and thermodynamic experiments employing SDS-PAGE, circular dichroism, fluorescence spectroscopy and analytical ultracentrifugation to determine the steps involved in folding and to ascertain why membrane proteins differ in their folding propensities. In the final aim we address how membrane proteins accommodate the introduction of ionizable mutations on the lipid facing surfaces of their membrane spanning regions. These experiments will provide insight into the mechanisms of how genetically-occurring ionizable group mutations cause malfunctions in human proteins. PUBLIC HEALTH RELEVANCE: Little is known about the dynamical process of membrane protein folding, and human diseases occur when membrane proteins misfold. An understanding of the factors that influence membrane protein stability and membrane protein folding will find practical utility in rationalizing the effects of genetic mutations that occur in membrane proteins. This knowledge will ultimately be useful in the design of therapeutic agents to combat disease.

描述（由申请人提供）：膜蛋白是重要的药物靶点，在细胞中发挥重要作用，膜蛋白的错误折叠与人类疾病相关，如囊性纤维化。由于缺乏膜蛋白折叠和稳定性的数据，开发膜蛋白错误折叠疾病的治疗方法的能力受到很大限制。除了天然状态，我们还需要了解未折叠、部分折叠和错误折叠的膜蛋白的构象和稳定性。相对于可溶性蛋白质，其折叠已经研究了几十年，膜蛋白质折叠的热力学和机械信息的数据库是微小的。由于生物物理折叠研究可以提供详细的序列-结构-功能的关系，没有在体内的研究或晶体结构可以提供，有必要进行额外的定量研究膜蛋白，以更好地了解他们的物理起源。在这个建议中，我们解决了缺乏膜蛋白折叠的信息。我们将研究8种外膜蛋白，OmpX，OmpW，OmpA，PagP，OmpT，OmpLa，FadL和Omp 85。我们的工作将增加一倍的独特的膜蛋白，其折叠已在脂质双层审问的数量。在第一个目标，我们将建立在体外条件下，他们折叠成膜制备的天然脂质提取物。在第二个目标中，我们将使用动力学和热力学实验，采用SDS-PAGE，圆二色性，荧光光谱和分析ultracenthegation，以确定折叠所涉及的步骤，并确定为什么膜蛋白在其折叠倾向不同。在最后的目标，我们解决了膜蛋白如何适应其跨膜区域的脂质面对表面上的电离突变的引入。这些实验将提供深入了解遗传发生的电离基团突变如何导致人类蛋白质故障的机制。公共卫生相关性：目前对膜蛋白折叠的动力学过程知之甚少，膜蛋白错误折叠会导致人类疾病的发生。了解影响膜蛋白稳定性和膜蛋白折叠的因素将在合理化膜蛋白中发生的基因突变的影响中找到实际效用。这些知识最终将有助于设计治疗药物来对抗疾病。