Using records of large mammal populations in the Urals to decipher the timing and effects of global climate change.

利用乌拉尔地区大型哺乳动物种群的记录来破译全球气候变化的时间和影响。

基本信息

  • 批准号:
    NE/C514766/1
  • 负责人:
  • 金额:
    $ 3.94万
  • 依托单位:
  • 依托单位国家:
    英国
  • 项目类别:
    Research Grant
  • 财政年份:
    2006
  • 资助国家:
    英国
  • 起止时间:
    2006 至 无数据
  • 项目状态:
    已结题

项目摘要

Current attempts to interpret the effects of global climate change hinge on the analysis of ice and sediment cores from places such as Greenland, Antarctica and the North Atlantic. However, while these records are very detailed and go back more than 750,000 years into the past, they are effectively a proxy record of the temperature of the sea surface in surrounding areas. Consequently, it is difficult to move from sea surface temperatures to an understanding of how land animals and plants are affected by the changes apparent in such records. Ancient DNA recovered from bones of large animals from the Late Pleistocene (c. 180-12,000 years ago) provides a completely new way to obtain detailed genetic records of how populations have changed through time (eg by becoming extinct, being replaced, or migrating elsewhere) as environmental conditions change. The Ural mountains happen to have an excellent set of caves at relatively high altitude, which contain thousands of well-preserved bones of the animals who occupied the area through the Late Pleistocene. We have shown that it is possible to extract DNA from these bones, and by carbon dating them it is possible to date the DNA sequences and work out when the population disruptions occur. By studying several different species (in this case horse, caribou, wolf and brown bear) we can survey broadly across the ecosystem and look for times when many species undergo major alteration in their genetic structure. This would suggest a major (ecosystem wide) event, and a prime candidate for the cause would be climate change. Our preliminary data suggests that major alterations can be seen at the same time in animal populations as far apart as Europe and Alaska/Canada, suggesting that planet-wide (or at least hemisphere-wide) events are responsible. While the animal DNA allows us to identify when things change, and to what extent populations move around or go extinct, it doesn't necessarily identify the cause of such agitation. To investigate this issue we will examine sediment (soil) samples from the same caves that the bones originate from. Recent work at Oxford have shown that soils contain DNA from animals and especially plants that occupied an area in the past, and can provide pictures of the range and type of vegetation at different times. Cave sediments are particularly useful for this form of study because they often have good stratigraphy (steady progression of younger to older soils down through the ground), and are preserved in a relatively intact state. By examining the vegetation records and comparing them to the animal populations, we should be able to identify what plant changes are occurring in periods of major upset, and perhaps why certain species are becoming extinct while others survive. We will then relate the changes in vegetation and animal populations to the physical ice and sediment records, to try and identify how signals in these records can be related to effects on the ground. It is already very interesting that several animal extinctions seem to relate to climatic fluctuations known as Heinrich events, when fresh water sheets on the Atlantic appear to alter current flows. It is possible that short sharp climatic alterations on land may not be readily apparent in the physical records, and it will be necessary to modify the way we interpret them. This information is critical for a better understanding of past climatic change, and in order to predict the future effects of current trends such as global warming.
目前解释全球气候变化影响的努力取决于对格陵兰岛、南极洲和北大西洋等地的冰和沉积物岩心的分析。然而,尽管这些记录非常详细,可以追溯到75万多年前,但它们实际上是周围地区海面温度的替代记录。因此,很难从海洋表面温度转移到了解陆地动植物如何受到此类记录中明显变化的影响。从晚更新世(约180-12000年前)大型动物的骨骼中发现的古代DNA提供了一种全新的方法,可以获得详细的遗传记录,了解随着环境条件的变化,种群如何随着时间的变化(例如,通过灭绝、被取代或迁移到其他地方)。乌拉尔山脉恰好有一组极好的洞穴,位于相对较高的海拔,其中包含数千具保存完好的动物骨骼,这些动物在晚更新世期间居住在该地区。我们已经证明了从这些骨骼中提取DNA是可能的,通过碳测年可以确定DNA序列的日期,并计算出种群破坏发生的时间。通过研究几个不同的物种(在这种情况下是马、驯鹿、狼和棕熊),我们可以在整个生态系统中进行广泛的调查,并寻找许多物种的遗传结构发生重大变化的时间。这将意味着一场重大的(生态系统范围的)事件,而气候变化将是原因的主要候选者。我们的初步数据表明,远至欧洲和阿拉斯加/加拿大的动物种群都可以同时看到重大变化,这表明全球范围(或至少是半球范围)的事件是造成这种变化的原因。虽然动物DNA让我们能够识别事物何时发生变化,以及种群在多大程度上迁徙或灭绝,但它不一定能确定这种骚动的原因。为了研究这个问题,我们将检查来自骨骼起源的同一洞穴的沉积物(土壤)样本。牛津大学最近的研究表明,土壤中含有来自动物的DNA,特别是过去占据某一区域的植物的DNA,并可以提供不同时间植被范围和类型的图片。洞穴沉积物对这种形式的研究特别有用,因为它们通常具有良好的地层学(从年轻土壤到老土壤的稳定发展),并且保存在相对完整的状态下。通过检查植被记录并将它们与动物种群进行比较,我们应该能够确定在植物大动荡时期发生了什么变化,也许还有一些物种正在灭绝,而另一些物种却幸存下来。然后,我们将把植物和动物种群的变化与物理冰和沉积物记录联系起来,试图确定这些记录中的信号如何与地面影响有关。已经非常有趣的是,几种动物的灭绝似乎与被称为海因里希事件的气候波动有关,当时大西洋的淡水层似乎改变了洋流。陆地上短暂的气候急剧变化在物理记录中可能不是很明显,有必要修改我们对它们的解释方式。这些信息对于更好地了解过去的气候变化以及预测当前趋势(如全球变暖)的未来影响至关重要。

项目成果

期刊论文数量(2)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)

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Beth Shapiro其他文献

Correction to: Metabarcoding meiofauna biodiversity assessment in four beaches of Northern Colombia: effects of sampling protocols and primer choice
  • DOI:
    10.1007/s10750-021-04600-2
  • 发表时间:
    2021-05-12
  • 期刊:
  • 影响因子:
    2.500
  • 作者:
    Lyda R. Castro;Rachel S. Meyer;Beth Shapiro;Sabrina Shirazi;Samuel Cutler;Ana M. Lagos;Sigmer Y. Quiroga
  • 通讯作者:
    Sigmer Y. Quiroga
The CALeDNA program: Citizen scientists and researchers inventory California's biodiversity
CALeDNA 计划:公民科学家和研究人员盘点加州的生物多样性
  • DOI:
    10.3733/ca.2021a0001
  • 发表时间:
    2021
  • 期刊:
  • 影响因子:
    1.3
  • 作者:
    Rachel S. Meyer;Miroslava Munguia Ramos;Meixi Lin;Teia M. Schweizer;Zachary J Gold;D. R. Ramos;Sabrina Shirazi;G. Kandlikar;Wai;E. Curd;Amanda C. Freise;J. M. Parker;Jason P. Sexton;R. Wetzer;N. Pentcheff;Adam R. Wall;L. Pipes;A. Garcia;M. P. Mejia;Tiara N Moore;Chloé Orland;Kimberly M. Ballare;Anna Worth;E. Beraut;Emma L Aronson;Rasmus Oestergaard Nielsen;Harris A. Lewin;Paul H. Barber;Jeffrey D. Wall;Nathan J B Kraft;Beth Shapiro;R. K. Wayne
  • 通讯作者:
    R. K. Wayne
Whole genome enrichment approach for genomic surveillance of emToxoplasma gondii/em
用于弓形虫基因组监测的全基因组富集方法
  • DOI:
    10.1016/j.fm.2023.104403
  • 发表时间:
    2024-04-01
  • 期刊:
  • 影响因子:
    4.600
  • 作者:
    Balaji Sundararaman;Karen Shapiro;Andrea Packham;Lauren E. Camp;Rachel S. Meyer;Beth Shapiro;Richard E. Green
  • 通讯作者:
    Richard E. Green
A chromosome-level genome assembly for the dugong (Dugong dugon)
儒艮(儒艮 dugon)的染色体水平基因组组装
  • DOI:
  • 发表时间:
    2024
  • 期刊:
  • 影响因子:
    3.1
  • 作者:
    Dorothy Nevé Baker;Linelle Abueg;Merly Escalona;K. Farquharson;J. Lanyon;D. Le Duc;Torsten Schöneberg;Dominic Absolon;Ying Sims;O. Fedrigo;Erich D. Jarvis;K. Belov;C. Hogg;Beth Shapiro
  • 通讯作者:
    Beth Shapiro
Ancient DNA typing of archaeological pig remains corroborates historical records
  • DOI:
    10.1016/j.jas.2009.09.029
  • 发表时间:
    2010-01-01
  • 期刊:
  • 影响因子:
  • 作者:
    James Haile;Greger Larson;Kimberley Owens;Keith Dobney;Beth Shapiro
  • 通讯作者:
    Beth Shapiro

Beth Shapiro的其他文献

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{{ truncateString('Beth Shapiro', 18)}}的其他基金

Collaborative Research: The Lost Pastures of Alaska's Last Megafauna
合作研究:阿拉斯加最后巨型动物消失的牧场
  • 批准号:
    2131589
  • 财政年份:
    2022
  • 资助金额:
    $ 3.94万
  • 项目类别:
    Standard Grant
Belmont Forum Collaborative Research: Future ArcTic Ecosystems (FATE): drivers of diversity and future scenarios from ethno-ecology, contemporary ecology and ancient DNA
贝尔蒙特论坛合作研究:未来北极生态系统(FATE):民族生态学、当代生态学和古代 DNA 的多样性驱动因素和未来情景
  • 批准号:
    1850949
  • 财政年份:
    2019
  • 资助金额:
    $ 3.94万
  • 项目类别:
    Continuing Grant
Collaborative Research: Inferring admixture history in non-model organisms using local ancestry detection
合作研究:使用当地血统检测推断非模式生物的混合历史
  • 批准号:
    1754451
  • 财政年份:
    2018
  • 资助金额:
    $ 3.94万
  • 项目类别:
    Standard Grant
Collaborative Research: Land Bridges, Ice-Free Corridors, and Biome Shifts: Impacts on the Evolution and Extinction of Horses in Ice-Age Beringia
合作研究:陆桥、无冰走廊和生物群落变化:对冰河时代白令陆桥马的进化和灭绝的影响
  • 批准号:
    1417036
  • 财政年份:
    2015
  • 资助金额:
    $ 3.94万
  • 项目类别:
    Standard Grant
Collaborative Research: Paleoclimate, Paleoenvironment and Other Potential Drivers of Extinction of Mammuthus primigenius , St. Paul Island, Pribilof Islands, Alaska
合作研究:古气候、古环境和其他猛犸象灭绝的潜在驱动因素,圣保罗岛,普里比洛夫群岛,阿拉斯加
  • 批准号:
    1203990
  • 财政年份:
    2013
  • 资助金额:
    $ 3.94万
  • 项目类别:
    Standard Grant
Collaborative research: Understanding the role of environmental change on the long-term population dynamics of one surviving and two extinct arctic mammals
合作研究:了解环境变化对一种幸存的和两种灭绝的北极哺乳动物的长期种群动态的作用
  • 批准号:
    0909456
  • 财政年份:
    2009
  • 资助金额:
    $ 3.94万
  • 项目类别:
    Standard Grant

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Using instrumented everyday gait to predict falls in older adults using the WHS cohort
使用 WHS 队列,使用仪器化的日常步态来预测老年人跌倒
  • 批准号:
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使用自然语言处理从癌症患者的临床叙述中提取症状负担
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