THE HIGH-RESOLUTION STRUCTURE OF M-MLV CA ASSEMBLED ON A LIPID MONOLAYER: HIV

组装在脂质单层上的 M-MLV CA 的高分辨率结构：HIV

• 批准号: 7956426
• 负责人: MARK D YEAGER
• 金额: $ 0.65万
• 依托单位: SCRIPPS RESEARCH INSTITUTE, THE
• 依托单位国家: 美国
• 财政年份: 2009
• 资助国家: 美国
• 起止时间: 2009-05-01 至 2010-04-30
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7956426
• 关键词: Biochemical; Biological Models; C-terminal; Capsid; Computer Retrieval of Information on Scientific Projects Database; Dimerization; Funding; Genome; Grant; HIV; HIV-1; In Vitro; Institution; Length; Lipid A; Microscopy; Modeling; Molecular; Morphology; N-terminal; Process; Proteins; RNA; Relative (related person); Research; Research Personnel; Resolution; Resources; Shapes; Source; Structural Models; Structure; Testing; United States National Institutes of Health; Variant; Viral; design; dimer; monolayer

This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. An essential step in retroviral infectivity is a process called "maturation", wherein the viral CA protein forms a closed capsid that acts to protect and organize the RNA genome. Mature retroviral capsids can be conical (HIV), spherical (M-MLV), or cylindrical (MPMV)(Vogt, 1997). Despite this variation in capsid morphology, the tertiary structure of all retroviral CA proteins is highly conserved, indicating that the different capsid shapes arise from common design principles. We have previously proposed that all retroviral capsids are built on hexameric lattices of CA and closed by incorporating pentameric declinations(Ganser et al., 1999; Li et al., 2000). The relative distribution of the declinations within the hexameric lattice defines the shape of the capsid. Two complementary model systems have been used by various groups to test this hypothesis. First, low-resolution biochemical and EM studies of in vitro assemblies have shown that full-length HIV-1 and retroviral CA proteins do form hexameric lattices, with the CA N-terminal domain (NTD) forming the hexamers, and the C-terminal domain (CTD) forming dimeric linkers that connect neighboring hexamers (Li et al., 2000; Mayo et al., 2002; Wilk et al., 2001). Second, x-ray crystallographic studies of truncated proteins have revealed a high-resolution model for the M-MLV hexameric domain, and several possible models for the CA dimerization domain(Ivanov et al., 2005; Jin et al., 1999; Mortuza et al., 2004; Worthylake et al., 1999). In addition, biochemical studies suggest the existence of NTD-CTD interactions essential for capsid formation(Ganser-Pornillos et al., 2004; Lanman et al., 2003). Therefore, a high-resolution structural model for full-length CA assemblies is required to unambiguously define protein-protein interfaces used by the NTD hexamer, determine the correct CTD dimer, and characterize the undefined NTD-CTD interface.

这个子项目是许多研究子项目中的一个 由NIH/NCRR资助的中心赠款提供的资源。子项目和 研究者（PI）可能从另一个NIH来源获得了主要资金， 因此可以在其他CRISP条目中表示。所列机构为 研究中心，而研究中心不一定是研究者所在的机构。 逆转录病毒感染性的一个重要步骤是称为“成熟”的过程，其中病毒CA蛋白形成封闭的衣壳，其起保护和组织RNA基因组的作用。 成熟的逆转录病毒衣壳可以是圆锥形（HIV）、球形（M-MLV）或圆柱形（MPMV）（沃格特，1997）。 尽管衣壳形态有这种变化，但所有逆转录病毒CA蛋白的三级结构都是高度保守的，这表明不同的衣壳形状来自共同的设计原则。 我们先前已经提出，所有逆转录病毒衣壳都建立在CA的六聚体晶格上，并通过掺入五聚体下倾而闭合（Ganser et al.，1999; Li等人，2000）。 在六聚体晶格内的下倾的相对分布限定了衣壳的形状。 两个互补的模型系统已被不同的团体用来检验这一假设。 首先，体外组装的低分辨率生物化学和EM研究表明，全长HIV-1和逆转录病毒CA蛋白确实形成六聚体晶格，其中CA N-末端结构域（NTD）形成六聚体，C-末端结构域（CTD）形成连接相邻六聚体的二聚体接头（Li et al.，2000;马约等人，2002; Wilk等人，2001年）。 其次，截短蛋白的X射线晶体学研究揭示了M-MLV六聚体结构域的高分辨率模型，以及CA二聚体结构域的几种可能模型（Ivanov et al.，2005; Jin等人，1999; Mortuza等人，2004; Worthylake等人，1999年）。 此外，生物化学研究表明存在对于衣壳形成必不可少的NTD-CTD相互作用（Ganser-Pornillos等人，2004; Lanman等人，2003年）。 因此，需要全长CA组装体的高分辨率结构模型来明确定义NTD六聚体使用的蛋白质-蛋白质界面，确定正确的CTD二聚体，并表征未定义的NTD-CTD界面。