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Identification of Proteins Important for Male Osteoporosis

鉴定对男性骨质疏松症重要的蛋白质

基本信息

批准号：
8535075
负责人：
HONG-WEN DENG
金额：
$ 53.71万
依托单位：
TULANE UNIVERSITY OF LOUISIANA
依托单位国家：
美国
项目类别：
财政年份：
2009
资助国家：
美国
起止时间：
2009-09-18 至 2016-07-31
项目状态：
已结题

来源：
https://reporter.nih.gov/project-details/8535075
关键词：
Accounting Address Affect Age Antibodies Biochemical Biology Blood specimen Bone Density Bone Marrow Bone Resorption Candidate Disease Gene Caucasians Caucasoid Race Cell Nucleus Cells China Cluster Analysis Complement Complex Cytoskeleton Cytosol DNA DNA Microarray Chip Detection Diagnosis Diagnostic Disease Dissection Epidemiologic Studies Epidemiology Etiology Female Foundations Fracture Funding Gender Gene Proteins Genes Genetic Genetic Polymorphism Genome Genomics Goals Grant Health Heritability Hydrophobicity In Vitro Informatics Ions Isoelectric Point Link Liquid Chromatography Membrane Membrane Proteins Mesenchymal Stem Cells Messenger RNA Metabolic Pathway Molecular Molecular Genetics Molecular Profiling Molecular Weight Nebraska Negative Finding Nuclear Osteoblasts Osteoclasts Osteogenesis Osteoporosis Outcome Pathway interactions Peptides Phenotype Population Positioning Attribute Prevention Principal Investigator Prognostic Marker Property Protein Precursors Proteins Proteome Proteomics Public Health Recruitment Activity Risk Sampling Scanning Science Specificity TNFRSF5 gene Testing Tobacco Trauma United States National Institutes of Health Validation Variant Western Blotting Woman Work base bone bone loss bone mass bone metabolism cohort design functional genomics genetic linkage genetic pedigree genome wide association study genome-wide hip bone in vivo innovation insight mRNA Expression male men monocyte mortality multidisciplinary nano novel osteoclastogenesis osteogenic osteoporosis with pathological fracture peripheral blood precursor cell programs protein expression research study sex tandem mass spectrometry two-dimensional

项目摘要

DESCRIPTION (provided by applicant): Identification of Proteins Important for Male Osteoporosis Osteoporosis is a major public health problem, mainly characterized by low bone mineral density (BMD). Variation of BMD is largely genetically determined (heritability of > 60%). Some BMD genes/genomic regions are gender specific. Although women have lower BMD than men, men suffer significantly higher mortality rate upon osteoporotic fractures. However, studies on osteoporosis have largely been focused on women. Few genetic epidemiological studies and no proteomic epidemiological study on osteoporosis have been performed on men. Bone marrow mesenchymal stem cells (BMMSCs) and peripheral blood monocytes (PBMs) are precursors for osteoblasts (bone formation cells) and osteoclasts (bone resorption cells), respectively. Proteomics is a powerful state-of-the-art strategy in genetic dissection of complex diseases, such as osteoporosis. However, a major problem affecting the power of current most proteomic studies is the limited detection of low abundance proteins and proteins with extreme isoelectric point, molecular weight, and hydrophobicity, especially membrane proteins. A NOVEL approach to this problem is subcellular proteome extraction to stepwise isolate proteins from membrane, cytosol, nucleus, and cytoskeleton E fractions followed by sensitive 2D-nanoLC-ESI-MS/MS for fractioning and identifying significant proteins. Our hypothesis is that changes in the protein expression profiles in BMMSCs and PBMs underlie molecular mechanisms of BMD variation and are associated with osteoporosis in men. Our major goals here are to identify proteins differentially expressed in BMMSCs and PBMs in men with high vs. low BMD and thus identify proteins (and their genes) associated with male osteoporosis in BMMSCs and PBMs. We will recruit 120 otherwise healthy Caucasian males at peak bone mass ages of 25-50, including 60 subjects with low and 60 with high BMD (age matched population bottom or top 20% respectively in terms of BMD). Half of the sample (30 low vs. 30 high BMD subjects) will serve as the "discovery cohort" and the other half (30 low vs. 30 high BMD subjects) will serve as the "replication cohort". We will take fresh bone marrow and peripheral blood samples from each male subject, as we do in our ongoing NIH SCOR projects for female subjects. BMMSCs and PBMs will be isolated by subcellular proteome extraction for membrane proteins together with proteins of cytosolic, nuclear, and cytoskeletal fractions. Proteomic profiling experiments and analyses will be performed on the isolated protein samples from the discovery E cohort using 2D-nanoLC-ESI-MS/MS . Significant differentially expressed proteins identified will be verified by Western blotting using samples from the replication cohort. The major results (particularly those obtained from PBMs) of this study may be used to design customary diagnostic protein antibody chips and/or protein markers for prognosis of male osteoporosis. In combination with our ongoing projects for identifying risk genes of osteoporosis through genome-wide DNA association scan and genome-wide mRNA expression study of osteogenic cells, this study will powerfully and efficiently identify genes and some of their functions for male osteoporosis.

描述（由申请人提供）：对男性骨质疏松症重要的蛋白质的鉴定骨质疏松症是一个主要的公共卫生问题，主要特征是低骨矿物质密度（BMD）。BMD的变化主要由遗传决定（遗传率> 60%）。一些BMD基因/基因组区域具有性别特异性。虽然女性的BMD低于男性，但男性在骨质疏松性骨折时的死亡率明显较高。然而，对骨质疏松症的研究主要集中在妇女身上。对男性骨质疏松症的遗传流行病学研究很少，也没有蛋白质组流行病学研究。骨髓间充质干细胞（BMMSCs）和外周血单核细胞（PBMs）分别是成骨细胞（骨形成细胞）和破骨细胞（骨吸收细胞）的前体。蛋白质组学是一个强大的国家的最先进的战略，在遗传解剖复杂的疾病，如骨质疏松症。然而，影响当前大多数蛋白质组学研究能力的主要问题是低丰度蛋白质和具有极端等电点、分子量和疏水性的蛋白质，特别是膜蛋白的检测有限。一种新的方法来解决这个问题是亚细胞蛋白质组提取逐步分离蛋白质从膜，胞质溶胶，细胞核和细胞骨架E级分，然后通过敏感的2D-nanoLC-ESI-MS/MS分级和鉴定重要的蛋白质。我们的假设是，BMMSCs和PBMs中蛋白质表达谱的变化是BMD变化的分子机制的基础，并与男性骨质疏松症有关。我们的主要目标是鉴定高BMD与低BMD男性BMMSC和PBM中差异表达的蛋白质，从而鉴定BMMSC和PBM中与男性骨质疏松症相关的蛋白质（及其基因）。我们将招募120名其他方面健康的高加索男性，峰值骨量年龄为25-50岁，包括60名低BMD受试者和60名高BMD受试者（年龄匹配人群的BMD分别为底部或顶部20%）。一半样本（30名低BMD受试者与30名高BMD受试者）将作为“发现队列”，另一半（30名低BMD受试者与30名高BMD受试者）将作为“复制队列”。我们将从每名男性受试者身上采集新鲜的骨髓和外周血样本，就像我们正在进行的针对女性受试者的NIH SCOR项目一样。将通过亚细胞蛋白质组提取分离BMMSC和PBM的膜蛋白以及细胞溶质、细胞核和细胞骨架组分的蛋白。将使用2D-nanoLC-ESI-MS/MS对来自discovery E队列的分离蛋白质样本进行蛋白质组学分析实验和分析。将使用来自复制队列的样品通过蛋白质印迹法验证鉴定的显著差异表达蛋白。本研究的主要结果（特别是从PBM中获得的结果）可用于设计常规诊断蛋白抗体芯片和/或蛋白标志物，用于男性骨质疏松症的预后。结合我们正在进行的通过全基因组DNA关联扫描和成骨细胞全基因组mRNA表达研究来识别骨质疏松症风险基因的项目，本研究将有力和有效地识别男性骨质疏松症的基因及其部分功能。

项目成果

期刊论文数量（8）

专著数量（0）

科研奖励数量（0）

会议论文数量（0）

专利数量（0）

The rs1142345 in TPMT Affects the Therapeutic Effect of Traditional Hypoglycemic Herbs in Prediabetes.

TPMT中rs1142345影响传统降糖中药治疗糖尿病前期的疗效

DOI：
10.1155/2013/327629
发表时间：
2013
期刊：
Evidence-based complementary and alternative medicine : eCAM
影响因子：
0
作者：
Li X;Lian FM;Guo D;Fan L;Tang J;Peng JB;Deng HW;Liu ZQ;Xiao XH;Wang YR;Qu KY;Deng S;Zhong Q;Sha YL;Zhu Y;Bai YJ;Chen XY;Zhou Q;Zhou HH;Tong XL;Zhang W
通讯作者：
Zhang W

Transcriptional regulation of BMP2 expression by the PTH-CREB signaling pathway in osteoblasts.