Making Sense of Voltage Sensors
Making Sense of Voltage Sensors
批准号:
8435413
负责人:
STEPHEN H. WHITE
金额:
$127.38万
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-02-06 至 2015-01-31
关键词:
Action PotentialsAmino AcidsAxonBindingBiophysicsCardiac MyocytesCell membraneCellsChemicalsChimera organismCollaborationsCouplingCrystallographyDefectDiseaseDrosophila genusElementsFamilyGated Ion ChannelGoalsHeart DiseasesHodgkin DiseaseInfluentialsInvestigationIon ChannelIon Channel GatingIonsKv1.2&apos channelLaboratoriesLipid BilayersLipidsLiquid substanceMeasurementMembraneMembrane PotentialsMembrane ProteinsModelingMolecularMovementMutagenesisNational Institute of Neurological Disorders and StrokeNerveNeuromuscular DiseasesNeurosciencesNeutron DiffractionNeutronsOrganic SynthesisPennsylvaniaPositioning AttributePotassium ChannelProbabilityResearchRestRoentgen RaysSignal TransductionSquidStructureTertiary Protein StructureTimeToxinTraining SupportUniversitiesVoltage-Gated Potassium ChannelWorkbasedesignfascinatemolecular dynamicsnovelprogramsresearch studyresponsesensorsimulationvoltagevoltage gated channel
中文摘要
电压门控通道是包含三个关键结构元素的膜蛋白:一个离子传导孔域(PD),可以区分K+、Na+和Ca2+离子;PD内的栅极,使闭合状态下的离子流动最小化;以及电压感应域(VSD),检测膜电压的变化并触发栅极的开启和关闭。一个基本的实验问题是很难通过晶体学捕获膜中vsd的关键原子细节。这个项目
英文摘要
Voltage-gated channels are membrane proteins that contain three crucial structural elements: an ion conduction pore domain (PD) that can distinguish K+ from Na+ and Ca2+ ions; a gate within the PD that minimizes the flow of ions in the closed state; and voltage-sensing domains (VSD) that detect changes in membrane voltage and trigger opening and closing of the gate. A fundamental experimental problem is the difficulty of capturing critical atomic details of VSDs in membranes by crystallography. This program project
(Stephen White, Director) is designed to obtain critical structural information about VSDs in fluid lipid bilayers through the concerted use of specific deuteration, neutron diffraction, neutron reflectivity, and molecular dynamics simulations. The Program consists of six closely interlocked Projects and an important collaboration: Core A. Administrative Core. Stephen White, PI. This core provides administrative support for the entire Program. Core B. Neutron Scattering Core. Stephen White, PI. The neutron Core provides technical and training support for neutron diffraction/reflectivity measurements that will be carried out at the NIST Center for Neutron Research. Core C. Organic Synthesis Core, Richard Chamberlin, PI. The Organic Synthesis Core will provide novel specifically deuterated compounds, such as lipids and amino acids, and will carry out semi-syntheses of VSDs and channels. It will be located at UC Irvine. Project 1. Molecular Dynamics Simulations of Channels and Voltage Sensor Domains. Douglas Tobias, PI. Located at UC Irvine,
this project is devoted to MD simulations that underlie-and inspire-most of the experimental work in projects 2 and 3. Project 2. Neutron Diffraction Studies of Voltage Sensor Molecules in Lipid Bilayers. Stephen White, PI. The experiments are directed toward a structural understanding of the interactions of the KvAP VSD in bilayers, the interaction of the KvAP S4 helix with lipids in multilamellar bilayers, and the disposition of the VSD-blocking toxin VSTxl toxin in bilayers. Project 3. Structural Studies of Voltage-Gated Potassium Channels as a Function of Transmembrane Electrochemical Potential. J. Kent Blasie, PI. Located at the University of Pennsylvania, this project is directed toward incorporating VSDs and whole potassium channels into single, tethered lipid bilayers and to observe by time-resolved x-ray reflectivity and neutron reflectivity structural changes in the sensors and channels induced by transmembrane electrochemical potentials.
Collaboration. Potassium Channel Biophysics. Kenton Swartz, PI. Dr. Swartz's laboratory at the NINDS has an influential research program devoted to the mechanism of voltage gated ion channels. His work focuses directly on the molecular basis of voltage sensor domains and their interactions with VSD-blocking toxins.
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DOI:
10.1021/jp2001964
发表时间:
2011-07-14
期刊:
The journal of physical chemistry. B
影响因子:
--
作者:
[Andersson M, Freites JA, Tobias DJ, White SH]
通讯作者:
White SH
Water pathways in the bacteriorhodopsin proton pump.
细菌视紫红质质子泵中的水通路。
DOI:
10.1007/s00232-010-9329-3
发表时间:
2011
期刊:
The Journal of membrane biology
影响因子:
--
作者:
[Bondar,Ana-Nicoleta, Fischer,Stefan, Smith,JeremyC]
通讯作者:
Smith,JeremyC
Hot and crowded: new insights into the dynamics of thermophilic enzymes from multiscale modeling.
炎热和拥挤:从多尺度建模对嗜热酶动力学的新见解。
DOI:
10.1016/j.bpj.2011.10.033
发表时间:
2011
期刊:
Biophysical journal
影响因子:
3.4
作者:
[Heyden,Matthias, Tobias,DouglasJ]
通讯作者:
Tobias,DouglasJ
Electrostatic interactions and hydrogen bond dynamics in chloride pumping by halorhodopsin.
盐视紫红质泵送氯离子中的静电相互作用和氢键动力学。
DOI:
10.1016/j.bbabio.2014.09.006
发表时间:
2014
期刊:
Biochimica et biophysica acta
影响因子:
--
作者:
[Jardón-Valadez,Eduardo, Bondar,Ana-Nicoleta, Tobias,DouglasJ]
通讯作者:
Tobias,DouglasJ
Dynamic Carboxylate/Water Networks on the Surface of the PsbO Subunit of Photosystem II.
光系统 II PsbO 亚基表面的动态羧酸盐/水网络。
DOI:
10.1021/acs.jpcb.5b06594
发表时间:
2015
期刊:
The journal of physical chemistry. B
影响因子:
--
作者:
[Lorch,Sebastian, Capponi,Sara, Pieront,Florian, Bondar,Ana-Nicoleta]
通讯作者:
Bondar,Ana-Nicoleta
共 10 条
Membrane Protein Folding and Assembly
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批准号:10612983
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项目类别:
-
资助金额:$39.25万
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财政年份:2021
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负责人:STEPHEN H. WHITE
-
依托单位:
Membrane Protein Folding and Assembly
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批准号:10411888
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项目类别:
-
资助金额:$39.25万
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财政年份:2021
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负责人:STEPHEN H. WHITE
-
依托单位:
Making Sense of Voltage Sensors
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批准号:8025961
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项目类别:
-
资助金额:$131.89万
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财政年份:2009
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负责人:STEPHEN H. WHITE
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依托单位:
Making Sense of Voltage Sensors
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批准号:7766185
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项目类别:
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资助金额:$133.52万
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财政年份:2009
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负责人:STEPHEN H. WHITE
-
依托单位:
Making Sense of Voltage Sensors
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批准号:8214529
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项目类别:
-
资助金额:$131.94万
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财政年份:2009
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负责人:STEPHEN H. WHITE
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依托单位:
Proj 2:Neutron Diffraction Studies of Voltage Sensor Molecules in Lipid Bilayers
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批准号:7625288
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项目类别:
-
资助金额:$26.43万
-
财政年份:2009
-
负责人:STEPHEN H. WHITE
-
依托单位:
Making Sense of Voltage Sensors
-
批准号:7569070
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项目类别:
-
资助金额:$141.18万
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财政年份:2009
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负责人:STEPHEN H. WHITE
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依托单位:
Membrane protein folding and assembly
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批准号:8392280
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项目类别:
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资助金额:$34.13万
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财政年份:2006
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负责人:STEPHEN H. WHITE
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依托单位:
Membrane protein folding and assembly
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批准号:8197738
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项目类别:
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资助金额:$35.37万
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财政年份:2006
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负责人:STEPHEN H. WHITE
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依托单位:
Membrane Protein Folding and Assembly
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批准号:7586269
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项目类别:
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资助金额:$35.2万
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财政年份:2006
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负责人:STEPHEN H. WHITE
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依托单位:
Membrane Protein Folding and Assembly
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批准号:8965458
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项目类别:
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资助金额:$39.15万
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财政年份:2006
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负责人:STEPHEN H. WHITE
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依托单位:
Membrane Protein Folding and Assembly
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批准号:7105886
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项目类别:
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资助金额:$36.8万
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财政年份:2006
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负责人:STEPHEN H. WHITE
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依托单位:
Membrane Protein Folding and Assembly
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批准号:9887022
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项目类别:
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资助金额:$18.1万
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财政年份:2006
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负责人:STEPHEN H. WHITE
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依托单位:
Membrane Protein Folding and Assembly
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批准号:7185822
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项目类别:
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资助金额:$34.24万
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财政年份:2006
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负责人:STEPHEN H. WHITE
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依托单位:
Membrane Protein Folding and Assembly
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批准号:7368018
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项目类别:
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资助金额:$34.21万
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财政年份:2006
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负责人:STEPHEN H. WHITE
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依托单位:
Membrane protein folding and assembly
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批准号:8588940
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项目类别:
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资助金额:$35.37万
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财政年份:2006
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负责人:STEPHEN H. WHITE
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依托单位:
Membrane protein folding and assembly
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批准号:8049911
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项目类别:
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资助金额:$37.58万
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财政年份:2006
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负责人:STEPHEN H. WHITE
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依托单位:
Concerted membrane diffraction and simulation studies
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批准号:7123129
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项目类别:
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资助金额:$2.5万
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财政年份:2003
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负责人:STEPHEN H. WHITE
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依托单位:
Concerted membrane diffraction and simulation studies
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批准号:6602807
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项目类别:
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资助金额:$24.3万
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财政年份:2003
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负责人:STEPHEN H. WHITE
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依托单位:
Concerted membrane diffraction and simulation studies
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批准号:6891911
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项目类别:
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资助金额:$24.25万
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财政年份:2003
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负责人:STEPHEN H. WHITE
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依托单位:
海外基金