Establishing the Molecular Basis of Glycoconjugate Glycosylation
Establishing the Molecular Basis of Glycoconjugate Glycosylation
批准号:
9313292
负责人:
JAMES H. PRESTEGARD
金额:
$39.55万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2017
资助国家:
美国
项目状态:
已结题
起止时间:
2017-07-01 至 2020-06-30
关键词:
AnabolismAnimalsAnisotropyBacteriaBindingBiochemicalBiologicalBiological AssayBiologyCarbohydratesCatalytic DomainCell CommunicationCell physiologyCellsChemicalsChemistryComplexCouplingCrystallographyCultured CellsDataDetectionDevelopmentDiagnosisDiseaseEnvironmentEnzymesFamilyFamily memberFucosyltransferaseFutureGeometryGlycobiologyGlycoconjugatesGlycolipidsGlycoproteinsGlycoside HydrolasesHumanIn VitroInstructionInvestigationIsotope LabelingKineticsKnowledgeLanthanoid Series ElementsLigandsLipidsLocationMammalian CellMethodologyModificationMolecularMolecular ChaperonesMolecular ProbesMonitorNaturePathologyPathway interactionsPhasePhysiologicalPlayPolysaccharidesPositioning AttributePost-Translational Protein ProcessingProceduresProcessProductionProteinsProtocols documentationReactionReagentRecombinantsRelaxationReporterResidual stateRoleSerumSialyltransferasesSignaling MoleculeSpecificitySpin LabelsStructural ModelsStructureSubstrate InteractionSubstrate SpecificitySystemTechnologyTestingTherapeuticTransfectionX ray diffraction analysisX-Ray CrystallographyX-Ray Diffractionanalogbasecarbohydrate structurecatalystdesignenzyme modelexperimental studyglycoprotein structureglycosylationglycosyltransferasein vivoinhibitor/antagonistmembermilligramnovelprogramssugartool
中文摘要
P R O J E C T I
这个项目是一个程序项目的一部分,目的是把一个高度活跃的表达平台
聚糖加工酶成为新的高特异性工具,用于合成复杂的聚糖,检测
它们存在于细胞环境中的糖蛋白和糖脂上,
疾病过程中的再分配。这不是一项小任务,因为估计有7000种不同的聚糖
在哺乳动物系统中,约有200种糖基转移酶(GT)参与其在人体中的合成。我们
将通过建立分子水平的理解,朝着完成这项任务迈出重要的一步。
GT特异性的起源。最初的焦点是在修饰聚糖末端中重要的GT的子集
糖蛋白和糖脂,唾液酸转移酶和岩藻糖基转移酶家族的成员,和
为其他家族的研究建立一个协议。追求三个总目标将有助于实现这一目标
认识1)将使用聚糖阵列表征GT的底物特异性,以鉴定糖
发生初级识别的残基和连接。将开发基于酶的新技术
允许识别聚糖的灵敏检测,结果将被馈送到内部和外部
合作者允许开发新的合成程序和标记策略,
展开数组。2)GT及其结合糖供体和受体的原子水平结构将被
制作。结合X射线晶体学和核磁共振方法将被应用,特别是
表达平台产生均匀糖基化GT的能力的优点
晶体学和稀疏同位素标记的GT用于NMR研究。由此产生的结构将提供
功能化受体和供体类似物的合理设计以及未来GT所需的信息
抑制剂和转基因酶。3)糖基转移酶的效率和特异性
将使用糖蛋白底物在细胞环境中检查反应,
蛋白质环境和细胞位置对GT特异性影响。这些信息将是必不可少的,
将分子水平特异性外推到基于酶的试剂在体内的作用。
英文摘要
P R O J E C T I
This project is a part of a program project directed at turning a platform for the expression of highly active
glycan processing enzymes into new high-specificity tools for the synthesis of complex glycans, the detection
of their existence on glycoproteins and glycolipids in cellular environments, and the monitoring of
redistribution in the course of disease. This is no small task as there are an estimated 7000 distinct glycans
in mammalian systems and ~200 glycosyltransferases (GTs) contributing to their synthesis in humans. We
will take an important step toward accomplishing this task by building a molecular level understanding ofthe
origin of GT specificity. The initial focus is a subset of GTs important in modifying the termini ofthe glycans
on glycoproteins and glycolipids, members ofthe sialyltransferase and fucosyltransferase families, and
building a protocol for the study of other families. Pursuit of three general aims will contribute to this
understanding. 1) Substrate specificity of GTs will be characterized using glycan arrays to identify sugar
residues and linkages where primary recognition occurs. Novel enzyme based technology will be developed
to allow sensitive detection of recognized glycans and the results will be fed to internal and external
collaborators to allow development of new synthetic procedures and tagging strategies that will further
expand arrays. 2) Atomic level structures of GTs and their bound sugar donors and acceptors will be
produced. A combination of X-ray crystallography and NMR methodology will be applied, taking particular
advantage ofthe expression platform's ability to produce homogeneously glycosylated GTs for
crystallography and sparse isotope labeled GTs for NMR investigation. The resulting structures will provide
information needed forthe rational design of functionalized acceptor and donor analogs, as well as future GT
inhibitors and genetically modified enzymes. 3) The efficiency and specificity of glycosyltransferase
reactions will be examined in cellular environments using a glycoprotein substrate in order to assess the
influence of a protein context and cellular location on GT specificity. The information will be essential in
extrapolating molecular level specificities to action of enzyme-based reagents in vivo.
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科研奖励(0)
会议论文
Sparse NMR Labeling Approach to Glycoprotein Structure and Function
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批准号:10388355
-
项目类别:
-
资助金额:$30.2万
-
财政年份:2019
-
负责人:JAMES H. PRESTEGARD
-
依托单位:
Sparse NMR Labeling Approach to Glycoprotein Structure and Function
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批准号:9810830
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项目类别:
-
资助金额:$30.2万
-
财政年份:2019
-
负责人:JAMES H. PRESTEGARD
-
依托单位:
Upgrade for a 600 MHz Structural Biology NMR
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批准号:9075568
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项目类别:
-
资助金额:$59.99万
-
财政年份:2016
-
负责人:JAMES H. PRESTEGARD
-
依托单位:
New Reagents for DNP Enhanced Metabolic Imaging
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批准号:8619048
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项目类别:
-
资助金额:$21.37万
-
财政年份:2014
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负责人:JAMES H. PRESTEGARD
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依托单位:
2013 Computational Aspects of Biomolecular NMR GRC/GRS
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批准号:8521526
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项目类别:
-
资助金额:$1.0万
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财政年份:2013
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负责人:JAMES H. PRESTEGARD
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依托单位:
ISOTOPE LABELING OF GLYCOPROTEIN GLYCANS FOR NMR OBSERVATION
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批准号:8361810
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项目类别:
-
资助金额:$0.18万
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财政年份:2011
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负责人:JAMES H. PRESTEGARD
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依托单位:
HEPARAN SULFATE LIGAND REQUIREMENTS OF PHAGE DISPLAY ANTIBODIES
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批准号:8361820
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项目类别:
-
资助金额:$0.18万
-
财政年份:2011
-
负责人:JAMES H. PRESTEGARD
-
依托单位:
NMR CHARACTERIZATION OF GALECTIN 3 LIGAND INTERACTIONS
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批准号:8361787
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项目类别:
-
资助金额:$0.18万
-
财政年份:2011
-
负责人:JAMES H. PRESTEGARD
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依托单位:
FTMS STUDIES OF GLYCOSAMINOGLYCANS
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批准号:8361791
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项目类别:
-
资助金额:$0.18万
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财政年份:2011
-
负责人:JAMES H. PRESTEGARD
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依托单位:
GLYCOSAMINOGLYCAN-PROTEIN INTERACTIONS IN MALARIA PARASITE INFECTION
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批准号:8361799
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项目类别:
-
资助金额:$0.18万
-
财政年份:2011
-
负责人:JAMES H. PRESTEGARD
-
依托单位:
GLYCOSAMINOGLYCAN-CHEMOKINE INTERACTIONS BY NMR & MASS SPECTROMETRY
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批准号:8361817
-
项目类别:
-
资助金额:$0.18万
-
财政年份:2011
-
负责人:JAMES H. PRESTEGARD
-
依托单位:
2011 Computational Aspects - Biomolecular NMR Gordon Research Conference
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批准号:8128124
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项目类别:
-
资助金额:$0.5万
-
财政年份:2011
-
负责人:JAMES H. PRESTEGARD
-
依托单位:
MODELING PROTEIN STRUCTURE USING SPARSE NMR CONSTRAINTS
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批准号:8361793
-
项目类别:
-
资助金额:$0.18万
-
财政年份:2011
-
负责人:JAMES H. PRESTEGARD
-
依托单位:
NMR METHODOLOGY FOR CHARACTERIZING CARBOHYDRATE-PROTEIN INTERACTIONS (TB1)
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批准号:8361784
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项目类别:
-
资助金额:$10.63万
-
财政年份:2011
-
负责人:JAMES H. PRESTEGARD
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依托单位:
METABOLIC MONITORING OF GAG SYNTHESIS - TC3
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批准号:8361811
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项目类别:
-
资助金额:$10.63万
-
财政年份:2011
-
负责人:JAMES H. PRESTEGARD
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依托单位:
THE REGULATORY ROLE OF HEPARAN SULFATE PROTEOGLYCANS ON ROBO4
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批准号:8361819
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项目类别:
-
资助金额:$0.18万
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财政年份:2011
-
负责人:JAMES H. PRESTEGARD
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依托单位:
GLYCAN INTERACTIONS WITH THE MAMMALIAN LECTIN, DC-SIGN
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批准号:8361823
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项目类别:
-
资助金额:$0.18万
-
财政年份:2011
-
负责人:JAMES H. PRESTEGARD
-
依托单位:
NEW NMR METHODOLOGY FOR CHARACTERIZING CARBOHYDRATE-PROTEIN INTERACTIONS
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批准号:8168839
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项目类别:
-
资助金额:$10.11万
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财政年份:2010
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负责人:JAMES H. PRESTEGARD
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依托单位:
STRUCTURE & LIGAND INTERACTION OF GLYCOSYLTRANSFERASES OF THE DOLICOL PATHWAY
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批准号:8168849
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项目类别:
-
资助金额:$0.17万
-
财政年份:2010
-
负责人:JAMES H. PRESTEGARD
-
依托单位:
MODELING PROTEIN STRUCTURE USING SPARSE NMR CONSTRAINTS
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批准号:8168852
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项目类别:
-
资助金额:$0.17万
-
财政年份:2010
-
负责人:JAMES H. PRESTEGARD
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依托单位:
海外基金