Computer-based assessment of tumor microenvironment (TME) in Follicular Lymphoma
Computer-based assessment of tumor microenvironment (TME) in Follicular Lymphoma
批准号:
9611415
负责人:
Metin Nafi Gurcan
金额:
$21.38万
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-05-01 至 2019-05-31
中文摘要
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英文摘要
DESCRIPTION (provided by applicant): The overall goals of this proposal are to: 1) Measure the prognostic impact of histologic grade (without and with computer assistance) of follicular lymphoma cases by comparing it with outcome measures; and 2) to develop a computer-assisted image analysis (CaIA) system to quantitatively assess the FL tumor microenvironment (TME); 3) Compare the effectiveness of combined prognostic measure incorporating grade (without and with computer assistance), TME parameters and existing FLIPI score. The proposed research aims to develop a clinically relevant, pathology-based prognostic model in FL utilizing computer image analysis to incorporate grade, tumor microenvironment (TME), and immunohistochemical (IHC) markers. Due to the variable clinical course in FL and increasing treatment options, a prognostic index would allow therapies to be tailored to the patient. Patients
with high risk disease may benefit form more intensive therapy, while patients with low risk disease may be appropriate for lower intensity therapy with a more favorable side effect profile. Furthermore, a prognostic index, which includes pathologic features, may ultimately become more relevant in the era of biologically targeted therapies. Our objective is to use advanced image analysis techniques to perform a quantitative and topographical study of the normal and tumor microenvironment and use this study as well as improved and consistent grading options in improving the current prognostic index. Our long-term goal is to translate the improved prognostic index results as better treatment options to FL patients. We plan to pursue the following three specific aims for this project: Specific Aim 1: Measure the prognostic impact of histologic grade (without and with computer assistance) of follicular lymphoma cases by comparing it with outcome measures; Specific Aim 2: Measure the impact of FL tumor microenvironment by comparing TME parameters with outcome measures; Specific Aim 3: Compare the effectiveness of combined prognostic measure incorporating grade (without and with computer assistance), TME parameters and existing FLIPI score. We have formed an experienced team with expertise in FL pathology and oncology, imaging and image analysis, observer studies and biostatistics. Successful completion of this project will exert a sustained and powerful impact on the field by the virtue of its development of a platform for researchers and clinicians to quantitatively and objectively evaluate FL TME, to improve the FL grading, and to incorporate these developments to form a better prognostic index. Microscopic image analysis software, which will be developed for quantification, will be usable for other diseases such as breast cancer, for which TME is also known to be an important predictor of clinical status. The software and data to carry out this project will be made freely available to the research community.
期刊论文(27)
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DOI:
10.1109/tbme.2011.2110648
发表时间:
2011-07
期刊:
IEEE transactions on bio-medical engineering
影响因子:
--
作者:
[Dundar MM, Badve S, Bilgin G, Raykar V, Jain R, Sertel O, Gurcan MN]
通讯作者:
Gurcan MN
DOI:
10.4103/2153-3539.159214
发表时间:
2015
期刊:
Journal of pathology informatics
影响因子:
--
作者:
[Smith B, Arabandi S, Brochhausen M, Calhoun M, Ciccarese P, Doyle S, Gibaud B, Goldberg I, Kahn CE Jr, Overton J, Tomaszewski J, Gurcan M]
通讯作者:
Gurcan M
DOI:
10.1371/journal.pone.0195621
发表时间:
2018
期刊:
PloS one
影响因子:
3.7
作者:
[Niazi MKK, Tavolara TE, Arole V, Hartman DJ, Pantanowitz L, Gurcan MN]
通讯作者:
Gurcan MN
DOI:
10.1109/titb.2012.2185829
发表时间:
2012-07
期刊:
IEEE transactions on information technology in biomedicine : a publication of the IEEE Engineering in Medicine and Biology Society
影响因子:
--
作者:
[Akakin HC, Gurcan MN]
通讯作者:
Gurcan MN
Feature-based registration of histopathology images with different stains: an application for computerized follicular lymphoma prognosis.
基于特征的组织病理学图像具有不同污渍的图像:计算机化卵泡淋巴瘤预后的应用。
DOI:
10.1016/j.cmpb.2009.04.012
发表时间:
2009-12
期刊:
Computer methods and programs in biomedicine
影响因子:
6.1
作者:
[Cooper L, Sertel O, Kong J, Lozanski G, Huang K, Gurcan M]
通讯作者:
Gurcan M
共 24 条
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Auto-Scope Software-Automated Otoscopy to Diagnose Ear Pathology
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财政年份:2018
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Pathology Image Informatics Platform for visualization, analysis and management
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批准号:9341177
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资助金额:$57.98万
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OAMiner: Integrative Knowledge Anchored Hypothesis Discovery
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批准号:7828221
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Computer-assisted Grading and Risk Stratification of Follicular Lymphoma
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批准号:8215904
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项目类别:
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资助金额:$30.73万
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财政年份:2009
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批准号:8024533
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资助金额:$27.24万
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财政年份:2009
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依托单位:
Computer-assisted Grading and Risk Stratification of Follicular Lymphoma
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批准号:7812178
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资助金额:$31.59万
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财政年份:2009
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依托单位:
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批准号:8758963
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项目类别:
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资助金额:$32.54万
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财政年份:2009
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负责人:Metin Nafi Gurcan
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依托单位:
Computer-based assessment of tumor microenvironment (TME) in Follicular Lymphoma
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批准号:9277412
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项目类别:
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资助金额:$2.04万
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财政年份:2009
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依托单位:
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批准号:7730133
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项目类别:
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资助金额:$32.06万
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财政年份:2009
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依托单位:
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资助金额:$58.04万
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财政年份:2009
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Computer-based assessment of tumor microenvironment (TME) in Follicular Lymphoma
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资助金额:$23.43万
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财政年份:2009
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负责人:Metin Nafi Gurcan
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依托单位:
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